Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p09630 Brassica napus
A05p16500 Brassica napus
Aa31LG9G14060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5240 Anthoceros agrestis
Actinidia03929 Actinidia chinensis
Ah.12g059820 Amaranthus hybridus
AL7G44120 Arabidopsis lyrata
Aqoxy2G00459 Aquilegia oxysepala
Aqoxy2G00460 Aquilegia oxysepala
Aqoxy2G00576 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4AIN5Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AI33FF Arachis hypogaea
AT5G35220 Arabidopsis thaliana
ATR0697G253 Amborella trichopoda
Atru.chr2.1494 Acer truncatum
AUR62036255 Chenopodium quinoa
AUR62038443 Chenopodium quinoa
BcaB02g08052 Brassica carinata
BcaC08g44312 Brassica carinata
BolC6t36931H Brassica oleracea
BraA04t16622Z Brassica rapa
BraA05t20555Z Brassica rapa
C06p17350 Brassica napus
CAN.G128.144 Capsicum annuum
CANSAT78G0414 Cannabis sativa
CARHR217310 Cardamine hirsuta
Carub.0007s3113 Capsella rubella
Ca_08305_v3 Cicer arietinum L.
CBR_g29290 Chara braunii
Cc06_g17170 Coffea canephora
Cc06_g17180 Coffea canephora
CDE02G2374 Ceratophyllum demersum
CDE05G2124 Ceratophyllum demersum
Cfa017707 Carpinus fangiana
Ciclev10019476m.g Citrus clementina
CiPaw.09G168200 Carya illinoinensis
ClCG04G004540 Citrullus lanatus
Cpa.g.sc161.26 Carica papaya
Cpa.g.sc161.27 Carica papaya
Cre03.g206929 Chlamydomonas reinhardtii
CsaV3_4G012000 Cucumis sativus L.
CSS0043599 Camellia sinensis var. sinensis
DCAR_013485 Daucus carota
Dinv05561 Davidia involucrata
Dinv25053 Davidia involucrata
Duzib177G0756 Durio zibethinus
ECA233G0274 Erigeron canadensis
EL10Ac5g11724 Beta vulgaris
Eucgr.K01523 Eucalyptus grandis
FAN19G2652 Fragaria x ananassa
FAN23G2292 Fragaria x ananassa
FAN26G0029 Fragaria x ananassa
FAN28G1866 Fragaria x ananassa
FvH4_1g28520 Fragaria vesca
Glyma.16G037100 Glycine max
Glyma.19G116000 Glycine max
Gohir.A11G230900 Gossypium hirsutum
Gohir.D11G242200 Gossypium hirsutum
Gorai.007G256500 Gossypium raimondii
GSVIVG01029948001 Vitis vinifera
HanXRQChr04g0114341 Helianthus annuus
HanXRQChr13g0398941 Helianthus annuus
HanXRQChr14g0444291 Helianthus annuus
HanXRQChr14g0454101 Helianthus annuus
Haze_20429 Corylus avellana
HPP92_012147 Vanilla planifolia
Hund15123 Selenicereus undatus
Lalb_Chr14g0364771 Lupinus albus
Lj1g0022988 Lotus japonicus
Lj1g0025826 Lotus japonicus
Lj4A924T26 Lonicera japonica
Lj4A924T27 Lonicera japonica
Lj4A924T28 Lonicera japonica
Lsat_1_v5_gn_6_31540 Lactuca sativa
Manes.09G137200 Manihot esculenta
Mapoly0088s0062 Marchantia polymorpha
MBI11_g23645_MAGBIO Magnolia biondii
MCO02G246 Micromonas commoda
MD09G1231200 Malus domestica
MD12G1009600 Malus domestica
MD14G1007000 Malus domestica
Medtr7g086430 Medicago truncatula
MELO3C008847.2 Cucumis melo
Migut.J01533 Erythranthe guttata
MSTRG.19728 Avicennia marina
Nitab4.5_0000387g0010 Nicotiana tabacum
Nitab4.5_0000613g0020 Nicotiana tabacum
Nn2g14541 Nelumbo nucifera
Oeu052792.1 Olea europaea
Oeu052794.1 Olea europaea
Os03g0792400 Oryza sativa ssp. japonica
Peaxi162Scf00575g00211 Petunia axillaris
PGR142G3047 Punica granatum
PGSC0003DMG400028216 Solanum tuberosum
Phvul.001G115400 Phaseolus vulgaris
Potri.013G064700 Populus trichocarpa
Pp3c18_19520 Physcomitrium patens
Pp3c19_5280 Physcomitrium patens
Pp3c20_16450 Physcomitrium patens
Pp3c21_2290 Physcomitrium patens
PRCOL_00004624 Prasinoderma coloniale
Prupe.7G011600 Prunus persica
Psat3g087360 Pisum sativum
PSO339G4097 Papaver somniferum
PSO384G1854 Papaver somniferum
RcHm_v2.0_Chr3g0496231 Rosa chinensis
Rhsim03G0050300 Rhododendron simsii
Sabra13G0056600 Salix brachista
SalBow6G3467 Salvia bowleyana
SalBow6G6179 Salvia bowleyana
Sc07g0007810 Simmondsia chinensis
Sed0023418 Sechium edule
SEGI_04101 Sequoiadendron giganteum
SEGI_23070 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22381 Striga asiatica
SMO196G0256 Selaginella moellendorffii
SMO234G0067 Selaginella moellendorffii
Solyc10g081470.2 Solanum lycopersicum
Sopen10g031970 Solanum pennellii
Sp7g07090 Schrenkiella parvula
TAR623G1725 Trochodendron aralioides
THA.LOC104823776 Tarenaya hassleriana
Thecc.05G243300 Theobroma cacao
Thhalv10003446m.g Eutrema salsugineum
TPR.G17873 Trifolium pratense
TWI32G0189 Tripterygium wilfordii
TWI60G1472 Tripterygium wilfordii
unitig_60.g25490 Utricularia gibba
vmacro07662 Vaccinium macrocarpon
vmacro07783 Vaccinium macrocarpon
VMungo1383G0364 Vigna mungo
Zm00001eb060350 Zea mays
Zm00001eb213150 Zea mays

User provided reference genes

Program Settings