Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p08870 Brassica napus
Aa31LG9G4610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis
Actinidia09490 Actinidia chinensis
Actinidia23729 Actinidia chinensis
Ah.08g213990 Amaranthus hybridus
Ah.08g214000 Amaranthus hybridus
AL9U10790 Arabidopsis lyrata
Aqoxy2G03761 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea
AT4G13200 Arabidopsis thaliana
ATR0736G055 Amborella trichopoda
Atru.chr3.3178 Acer truncatum
AUR62008873 Chenopodium quinoa
AUR62031836 Chenopodium quinoa
BcaB03g16138 Brassica carinata
BcaC02g09439 Brassica carinata
BolC4t25837H Brassica oleracea
BraA04t16580Z Brassica rapa
C04p42740 Brassica napus
CAN.G122.4 Capsicum annuum
CANSAT01G0442 Cannabis sativa
CARHR218670 Cardamine hirsuta
Carub.0007s2947 Capsella rubella
Ca_20129_v3 Cicer arietinum L.
Cc03_g12390 Coffea canephora
CDE01G0686 Ceratophyllum demersum
CDE02G3372 Ceratophyllum demersum
Cfa002560 Carpinus fangiana
Ciclev10022209m.g Citrus clementina
CiPaw.03G150900 Carya illinoinensis
CiPaw.04G106200 Carya illinoinensis
ClCG09G009110 Citrullus lanatus
Cpa.g.sc8.170 Carica papaya
Cre01.g032750 Chlamydomonas reinhardtii
CsaV3_7G025830 Cucumis sativus L.
CSS0024949 Camellia sinensis var. sinensis
CSS0032503 Camellia sinensis var. sinensis
DCAR_018555 Daucus carota
Dinv04661 Davidia involucrata
Dinv19212 Davidia involucrata
Duzib133G0404 Durio zibethinus
Duzib138G0327 Durio zibethinus
ECA248G2691 Erigeron canadensis
EL10Ac7g17785 Beta vulgaris
Eucgr.H00802 Eucalyptus grandis
FAN15G1595 Fragaria x ananassa
FAN15G1921 Fragaria x ananassa
FAN24G3425 Fragaria x ananassa
FAN27G0062 Fragaria x ananassa
FvH4_2g19250 Fragaria vesca
Glyma.03G080200 Glycine max
Glyma.18G149300 Glycine max
Gohir.A03G143925 Gossypium hirsutum
Gohir.A07G156200 Gossypium hirsutum
Gohir.A09G200610 Gossypium hirsutum
Gohir.D07G162500 Gossypium hirsutum
Gorai.001G116800 Gossypium raimondii
Gorai.001G128300 Gossypium raimondii
Gorai.001G186100 Gossypium raimondii
Gorai.002G226800 Gossypium raimondii
Gorai.009G365800 Gossypium raimondii
GSVIVG01028583001 Vitis vinifera
HanXRQChr01g0014641 Helianthus annuus
Haze_24787 Corylus avellana
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla
HPP92_022492 Vanilla planifolia
Hund18350 Selenicereus undatus
Lalb_Chr07g0194041 Lupinus albus
Lj2A1133T33 Lonicera japonica
Lj3g0000124 Lotus japonicus
Lsat_1_v5_gn_5_179880 Lactuca sativa
Manes.12G041200 Manihot esculenta
Manes.13G044700 Manihot esculenta
Mapoly0028s0026 Marchantia polymorpha
MBI06_g14323_MAGBIO Magnolia biondii
MBI07_g23671_MAGBIO Magnolia biondii
MBI10_g44186_MAGBIO Magnolia biondii
MCO02G464 Micromonas commoda
MD05G1177500 Malus domestica
MD10G1165900 Malus domestica
Medtr4g017880 Medicago truncatula
MELO3C012764.2 Cucumis melo
Migut.D00525 Erythranthe guttata
Migut.N02263 Erythranthe guttata
MSTRG.17548 Avicennia marina
MSTRG.18383 Avicennia marina
Nitab4.5_0000866g0050 Nicotiana tabacum
Nitab4.5_0003790g0020 Nicotiana tabacum
Nn1g07794 Nelumbo nucifera
Oeu015899.1 Olea europaea
Os04g0513000 Oryza sativa ssp. japonica
Peaxi162Scf00107g01314 Petunia axillaris
PGR044G0377 Punica granatum
PGSC0003DMG400028009 Solanum tuberosum
Phvul.010G014200 Phaseolus vulgaris
Potri.002G241000 Populus trichocarpa
Pp3c16_19690 Physcomitrium patens
Pp3c5_25810 Physcomitrium patens
PRCOL_00003747 Prasinoderma coloniale
Prupe.8G204400 Prunus persica
Psat7g243200 Pisum sativum
PSO017G2163 Papaver somniferum
PSO063G4085 Papaver somniferum
QL02p021928 Quercus lobata
RcHm_v2.0_Chr6g0285061 Rosa chinensis
Rhsim01G0257200 Rhododendron simsii
Sabra02G0183600 Salix brachista
SalBow2G0198 Salvia bowleyana
SalBow4G1286 Salvia bowleyana
Sc05g0002430 Simmondsia chinensis
Sed0001531 Sechium edule
Sed0008993 Sechium edule
SEGI_25444 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04650 Striga asiatica
Solyc09g061440.4 Solanum lycopersicum
Sopen09g024260 Solanum pennellii
Sp7g10660 Schrenkiella parvula
TAR194G0001 Trochodendron aralioides
TAR362G0919 Trochodendron aralioides
TAR633G1722 Trochodendron aralioides
THA.LOC104804605 Tarenaya hassleriana
THA.LOC104808781 Tarenaya hassleriana
Thecc.01G227600 Theobroma cacao
Thhalv10026263m.g Eutrema salsugineum
TPR.G8219 Trifolium pratense
TWI18G1166 Tripterygium wilfordii
TWI36G0226 Tripterygium wilfordii
unitig_22.g6325 Utricularia gibba
vmacro14762 Vaccinium macrocarpon
VMungo0331G1358 Vigna mungo
Zm00001eb426500 Zea mays

User provided reference genes

Program Settings