Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p39580 Brassica napus
Aa31LG4G12580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1814 Anthoceros agrestis
Actinidia20308 Actinidia chinensis
Ah.14g081090 Amaranthus hybridus
Ah.15g098250 Amaranthus hybridus
AL6G31690 Arabidopsis lyrata
Aqoxy7G01989 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G1MC5D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WI060A Arachis hypogaea
AT5G20140 Arabidopsis thaliana
ATR0026G035 Amborella trichopoda
Atru.chr7.1254 Acer truncatum
AUR62011058 Chenopodium quinoa
AUR62033437 Chenopodium quinoa
AUR62043908 Chenopodium quinoa
AUR62044155 Chenopodium quinoa
BolC7t44391H Brassica oleracea
BraA06t26872Z Brassica rapa
C07p38700 Brassica napus
CAN.G713.5 Capsicum annuum
CANSAT56G3469 Cannabis sativa
CARHR192690 Cardamine hirsuta
Carub.0006s1852 Capsella rubella
Ca_28117_v3 Cicer arietinum L.
CBR_g37636 Chara braunii
Cc06_g09080 Coffea canephora
CDE04G0347 Ceratophyllum demersum
Cfa003320 Carpinus fangiana
Ciclev10008577m.g Citrus clementina
CiPaw.03G238600 Carya illinoinensis
ClCG06G010600 Citrullus lanatus
ClCG06G010680 Citrullus lanatus
COL.COLO4_34981 Corchorus olitorius
Cpa.g.sc75.80 Carica papaya
Cre06.g304400 Chlamydomonas reinhardtii
Cre16.g666550 Chlamydomonas reinhardtii
CsaV3_1G031090 Cucumis sativus L.
CsaV3_1G031110 Cucumis sativus L.
CSS0039949 Camellia sinensis var. sinensis
DCAR_017850 Daucus carota
DCAR_017851 Daucus carota
Dinv41550 Davidia involucrata
Duzib150G0421 Durio zibethinus
Duzib168G0824 Durio zibethinus
EL10Ac8g18577 Beta vulgaris
Eucgr.C01104 Eucalyptus grandis
FAN19G1300 Fragaria x ananassa
FvH4_1g04030 Fragaria vesca
Glyma.06G214700 Glycine max
Gohir.A05G019800 Gossypium hirsutum
Gohir.D05G020900 Gossypium hirsutum
Gorai.009G021100 Gossypium raimondii
GSVIVG01015471001 Vitis vinifera
HanXRQChr03g0064691 Helianthus annuus
HanXRQChr05g0146761 Helianthus annuus
HanXRQChr05g0148621 Helianthus annuus
HanXRQChr10g0316681 Helianthus annuus
HanXRQChr10g0316701 Helianthus annuus
HanXRQChr16g0511261 Helianthus annuus
Haze_25642 Corylus avellana
Haze_25647 Corylus avellana
Hma1.2p1_0018F.1_g012920 Hydrangea macrophylla
HPP92_002797 Vanilla planifolia
Hund00886 Selenicereus undatus
Lalb_Chr08g0234911 Lupinus albus
Lj1g0016893 Lotus japonicus
Lj7C636G5 Lonicera japonica
Lsat_1_v5_gn_5_97440 Lactuca sativa
Manes.06G059700 Manihot esculenta
Mapoly0088s0023 Marchantia polymorpha
MCO05G652 Micromonas commoda
MD00G1025900 Malus domestica
MD00G1026800 Malus domestica
MD00G1026900 Malus domestica
MD15G1178700 Malus domestica
Medtr2g054130 Medicago truncatula
Medtr2g055010 Medicago truncatula
MELO3C025286.2 Cucumis melo
MELO3C029668.2 Cucumis melo
Migut.J01232 Erythranthe guttata
MSTRG.6078 Avicennia marina
Nitab4.5_0003235g0060 Nicotiana tabacum
Nitab4.5_0006991g0050 Nicotiana tabacum
Nn2g11903 Nelumbo nucifera
Nn3g21844 Nelumbo nucifera
Nn8g39344 Nelumbo nucifera
Nn8g40745 Nelumbo nucifera
Oeu055933.1 Olea europaea
Oeu058585.1 Olea europaea
Os06g0597900 Oryza sativa ssp. japonica
Peaxi162Scf00170g00322 Petunia axillaris
PGR142G3773 Punica granatum
PGSC0003DMG400001057 Solanum tuberosum
Phvul.009G199300 Phaseolus vulgaris
Potri.018G073501 Populus trichocarpa
Pp3c4_1490 Physcomitrium patens
Prupe.7G236600 Prunus persica
Psat1g026560 Pisum sativum
PSO017G1905 Papaver somniferum
PSO170G5466 Papaver somniferum
PSO170G6086 Papaver somniferum
QL02p087039 Quercus lobata
QL02p087048 Quercus lobata
RcHm_v2.0_Chr2g0089501 Rosa chinensis
Rhsim08G0067200 Rhododendron simsii
Rhsim08G0067400 Rhododendron simsii
Sabra18G0062300 Salix brachista
SalBow1G1298 Salvia bowleyana
SalBow1G2453 Salvia bowleyana
Sc08g0006900 Simmondsia chinensis
Sed0000713 Sechium edule
Sed0002298 Sechium edule
SEGI_03752 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31996 Striga asiatica
SMO356G0465 Selaginella moellendorffii
Solyc12g006805.1 Solanum lycopersicum
Sopen12g002780 Solanum pennellii
Sp2g18290 Schrenkiella parvula
THA.LOC104811045 Tarenaya hassleriana
Thecc.09G119200 Theobroma cacao
Thhalv10004416m.g Eutrema salsugineum
TPR.G7510 Trifolium pratense
TWI32G0125 Tripterygium wilfordii
unitig_21.g20470 Utricularia gibba
unitig_744.g24375 Utricularia gibba
vmacro20639 Vaccinium macrocarpon
vmacro20640 Vaccinium macrocarpon
vmacro20689 Vaccinium macrocarpon
vmacro23193 Vaccinium macrocarpon
vmacro23194 Vaccinium macrocarpon
VMungo1309G0159 Vigna mungo
Zm00001eb385860 Zea mays

User provided reference genes

Program Settings