Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p17170 Brassica napus
Aa31LG2G9680 Aethionema arabicum
Actinidia26146 Actinidia chinensis
Ah.04g161590 Amaranthus hybridus
Ah.06g193070 Amaranthus hybridus
AL2G15640 Arabidopsis lyrata
Aqoxy6G00184 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.05MEX4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3M3641 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.90JL3B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BDEX7B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G2QNI1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IQ7NU0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JTZ9FV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MS6DZN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.REH2VN Arachis hypogaea
AT1G60870 Arabidopsis thaliana
ATR0794G127 Amborella trichopoda
Atru.chr6.645 Acer truncatum
AUR62000032 Chenopodium quinoa
AUR62019202 Chenopodium quinoa
BcaB07g31236 Brassica carinata
BcaC04g22278 Brassica carinata
BolC9t55037H Brassica oleracea
BraA09t37350Z Brassica rapa
C09p21370 Brassica napus
CAN.G1577.17 Capsicum annuum
CAN.G1577.19 Capsicum annuum
CANSAT21G1779 Cannabis sativa
CANSAT35G1534 Cannabis sativa
CANSAT54G2878 Cannabis sativa
CARHR051910 Cardamine hirsuta
Carub.0002s0442 Capsella rubella
Ca_00076_v3 Cicer arietinum L.
Cc02_g22480 Coffea canephora
CDE08G1156 Ceratophyllum demersum
Ciclev10002788m.g Citrus clementina
CiPaw.04G102300 Carya illinoinensis
CiPaw.05G044300 Carya illinoinensis
CiPaw.06G147400 Carya illinoinensis
ClCG05G009710 Citrullus lanatus
COL.COLO4_17867 Corchorus olitorius
Cpa.g.sc113.61 Carica papaya
CsaV3_3G018850 Cucumis sativus L.
CSS0009830 Camellia sinensis var. sinensis
CSS0016002 Camellia sinensis var. sinensis
CSS0021530 Camellia sinensis var. sinensis
CSS0048748 Camellia sinensis var. sinensis
DCAR_029253 Daucus carota
Dinv19366 Davidia involucrata
Dinv24281 Davidia involucrata
Duzib052G0157 Durio zibethinus
Duzib132G0062 Durio zibethinus
ECA234G2605 Erigeron canadensis
EL10Ac4g10345 Beta vulgaris
Eucgr.G00579 Eucalyptus grandis
FAN04G0122 Fragaria x ananassa
FAN08G1303 Fragaria x ananassa
FAN13G3279 Fragaria x ananassa
FAN18G2654 Fragaria x ananassa
FvH4_5g29530 Fragaria vesca
Glyma.15G046700 Glycine max
Gohir.A01G000600 Gossypium hirsutum
Gohir.A02G126300 Gossypium hirsutum
Gohir.A03G211800 Gossypium hirsutum
Gohir.A04G127300 Gossypium hirsutum
Gohir.A06G179950 Gossypium hirsutum
Gohir.A08G134100 Gossypium hirsutum
Gohir.D01G000400 Gossypium hirsutum
Gohir.D02G233200 Gossypium hirsutum
Gohir.D04G172050 Gossypium hirsutum
Gorai.002G001000 Gossypium raimondii
Gorai.005G261100 Gossypium raimondii
Gorai.012G161100 Gossypium raimondii
GSVIVG01022927001 Vitis vinifera
HanXRQChr10g0290391 Helianthus annuus
HanXRQChr10g0301391 Helianthus annuus
Haze_01670 Corylus avellana
Hma1.2p1_0217F.1_g092030 Hydrangea macrophylla
HPP92_024638 Vanilla planifolia
Lalb_Chr15g0090661 Lupinus albus
Lj6g0008702 Lotus japonicus
Lsat_1_v5_gn_5_109301 Lactuca sativa
Lsat_1_v5_gn_5_89321 Lactuca sativa
Manes.07G015600 Manihot esculenta
Manes.10G129200 Manihot esculenta
MBI06_g20717_MAGBIO Magnolia biondii
MD08G1229100 Malus domestica
MD15G1423100 Malus domestica
Medtr2g007190 Medicago truncatula
MELO3C019478.2 Cucumis melo
Migut.B00838 Erythranthe guttata
Nitab4.5_0002245g0020 Nicotiana tabacum
Nitab4.5_0010062g0030 Nicotiana tabacum
Nn1g08723 Nelumbo nucifera
Nn5g28217 Nelumbo nucifera
Oeu000185.1 Olea europaea
Oeu025682.1 Olea europaea
Oeu045943.1 Olea europaea
Os06g0209400 Oryza sativa ssp. japonica
Peaxi162Scf00011g00326 Petunia axillaris
PGR042G3410 Punica granatum
PGSC0003DMG400023792 Solanum tuberosum
Phvul.002G250100 Phaseolus vulgaris
Phvul.006G214500 Phaseolus vulgaris
Potri.006G003600 Populus trichocarpa
Potri.016G004300 Populus trichocarpa
Prupe.1G568400 Prunus persica
Psat1g224760 Pisum sativum
PSO528G0075 Papaver somniferum
QL11p018494 Quercus lobata
RcHm_v2.0_Chr7g0222451 Rosa chinensis
Rhsim11G0129500 Rhododendron simsii
Sabra16G0009100 Salix brachista
Sabra16G0009300 Salix brachista
SalBow1G5664 Salvia bowleyana
SalBow5G4729 Salvia bowleyana
Sc16g0012020 Simmondsia chinensis
Sed0000042 Sechium edule
Sed0012668 Sechium edule
Solyc01g104190.2 Solanum lycopersicum
Sopen01g046630 Solanum pennellii
Sp2g03790 Schrenkiella parvula
TAR376G0254 Trochodendron aralioides
TAR628G0071 Trochodendron aralioides
THA.LOC104819299 Tarenaya hassleriana
Thecc.02G038300 Theobroma cacao
Thhalv10023746m.g Eutrema salsugineum
TPR.G23065 Trifolium pratense
TWI23G0568 Tripterygium wilfordii
TWI59G1122 Tripterygium wilfordii
VMungo0251G0848 Vigna mungo
VMungo0540G2478 Vigna mungo

User provided reference genes

Program Settings