Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p65800 Brassica napus
A08p23210 Brassica napus
Aa31LG6G15340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis
Actinidia28237 Actinidia chinensis
Ah.11g050680 Amaranthus hybridus
AL7G12180 Arabidopsis lyrata
Aqoxy3G00238 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DH96WI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F9QSZL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y76I0L Arachis hypogaea
AT4G39920 Arabidopsis thaliana
ATR0584G053 Amborella trichopoda
Atru.chr11.1549 Acer truncatum
Atru.chr7.1487 Acer truncatum
Atru.chr7.1491 Acer truncatum
AUR62008049 Chenopodium quinoa
AUR62028624 Chenopodium quinoa
BcaB03g12293 Brassica carinata
BcaC01g00330 Brassica carinata
BcaNung02300 Brassica carinata
BolC3t20106H Brassica oleracea
BolC7t46692H Brassica oleracea
BraA03t15633Z Brassica rapa
BraA08t34278Z Brassica rapa
C03p78540 Brassica napus
C07p62780 Brassica napus
CAN.G151.26 Capsicum annuum
CARHR246770 Cardamine hirsuta
Carub.0007s0187 Capsella rubella
Ca_17743_v3 Cicer arietinum L.
Cc07_g15080 Coffea canephora
CDE04G0616 Ceratophyllum demersum
Cfa017077 Carpinus fangiana
Cfa025806 Carpinus fangiana
Ciclev10020973m.g Citrus clementina
CiPaw.03G142700 Carya illinoinensis
ClCG07G017360 Citrullus lanatus
COL.COLO4_27255 Corchorus olitorius
Cpa.g.sc615.1 Carica papaya
Cre03.g200150 Chlamydomonas reinhardtii
CsaV3_4G004590 Cucumis sativus L.
CsaV3_UNG120970 Cucumis sativus L.
CsaV3_UNG160200 Cucumis sativus L.
CsaV3_UNG223580 Cucumis sativus L.
DCAR_003483 Daucus carota
Dinv21896 Davidia involucrata
Duzib147G1529 Durio zibethinus
ECA233G0618 Erigeron canadensis
EL10Ac5g10569 Beta vulgaris
Eucgr.B03900 Eucalyptus grandis
FAN19G0980 Fragaria x ananassa
FAN23G0004 Fragaria x ananassa
FAN26G1261 Fragaria x ananassa
FvH4_1g20700 Fragaria vesca
Glyma.05G177800 Glycine max
Glyma.08G134800 Glycine max
Gohir.A11G202400 Gossypium hirsutum
Gohir.D11G220800 Gossypium hirsutum
Gorai.007G237000 Gossypium raimondii
GSVIVG01004856001 Vitis vinifera
HanXRQChr17g0554861 Helianthus annuus
Haze_24910 Corylus avellana
Haze_24914 Corylus avellana
Hma1.2p1_0297F.1_g117050 Hydrangea macrophylla
Hma1.2p1_0308F.1_g120270 Hydrangea macrophylla
Hma1.2p1_0308F.1_g120280 Hydrangea macrophylla
HPP92_013925 Vanilla planifolia
HPP92_014012 Vanilla planifolia
Lalb_Chr06g0163471 Lupinus albus
Lj4g0026645 Lotus japonicus
Lsat_1_v5_gn_8_137181 Lactuca sativa
Manes.12G134100 Manihot esculenta
Mapoly0002s0046 Marchantia polymorpha
MBI05_g37046_MAGBIO Magnolia biondii
MBI15_g14577_MAGBIO Magnolia biondii
MCO11G662 Micromonas commoda
MD01G1031400 Malus domestica
MD05G1043000 Malus domestica
Medtr8g090180 Medicago truncatula
MELO3C017607.2 Cucumis melo
Migut.L00117 Erythranthe guttata
Migut.L00135 Erythranthe guttata
MSTRG.3773 Avicennia marina
Nitab4.5_0009581g0010 Nicotiana tabacum
Nn2g14007 Nelumbo nucifera
Nn5g30099 Nelumbo nucifera
Oeu032409.1 Olea europaea
Os02g0557000 Oryza sativa ssp. japonica
Peaxi162Scf00054g00186 Petunia axillaris
PGR102G2441 Punica granatum
PGSC0003DMG400027189 Solanum tuberosum
Phvul.002G256800 Phaseolus vulgaris
Potri.005G074700 Populus trichocarpa
Potri.007G093800 Populus trichocarpa
Pp3c13_2250 Physcomitrium patens
Pp3c4_21480 Physcomitrium patens
PRCOL_00003435 Prasinoderma coloniale
PRCOL_00004923 Prasinoderma coloniale
Prupe.6G188100 Prunus persica
Psat7g055120 Pisum sativum
PSO170G2230 Papaver somniferum
PSO339G2019 Papaver somniferum
PSO801G0022 Papaver somniferum
QL06p049237 Quercus lobata
RcHm_v2.0_Chr2g0113151 Rosa chinensis
Rhsim01G0133800 Rhododendron simsii
RhsimUnG0233600 Rhododendron simsii
Sabra05G0061500 Salix brachista
SalBow7G4497 Salvia bowleyana
Sc05g0001510 Simmondsia chinensis
Sed0022481 Sechium edule
SEGI_25682 Sequoiadendron giganteum
SEGI_41531 Sequoiadendron giganteum
SGA_v2.0_scaffold115G32189 Striga asiatica
SGA_v2.0_scaffold334G49051 Striga asiatica
SMO143G0283 Selaginella moellendorffii
Solyc05g052840.1 Solanum lycopersicum
Sopen05g031350 Solanum pennellii
Sp7g35960 Schrenkiella parvula
TAR381G0927 Trochodendron aralioides
THA.LOC104807688 Tarenaya hassleriana
Thecc.01G100600 Theobroma cacao
Thhalv10025595m.g Eutrema salsugineum
TPR.G6200 Trifolium pratense
TWI77G0137 Tripterygium wilfordii
TWI81G0999 Tripterygium wilfordii
unitig_32.g10701 Utricularia gibba
vmacro12962 Vaccinium macrocarpon
vmacro17311 Vaccinium macrocarpon
VMungo0251G0721 Vigna mungo
VMungo0540G1211 Vigna mungo
Zm00001eb243870 Zea mays

User provided reference genes

Program Settings