Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p11880 Brassica napus
A10p16360 Brassica napus
Aa31LG1G12030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1366 Anthoceros agrestis
Actinidia08549 Actinidia chinensis
Actinidia12881 Actinidia chinensis
Ah.08g220240 Amaranthus hybridus
AL48U10050 Arabidopsis lyrata
AL8G35550 Arabidopsis lyrata
Aqoxy1G00802 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.02RT51 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0PDV4E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L8JNUU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3Y99M Arachis hypogaea
AT5G59140 Arabidopsis thaliana
ATR0210G023 Amborella trichopoda
Atru.chr3.4025 Acer truncatum
AUR62028437 Chenopodium quinoa
AUR62041948 Chenopodium quinoa
BcaB01g04606 Brassica carinata
BcaB01g04618 Brassica carinata
BcaB08g36282 Brassica carinata
BcaC04g19811 Brassica carinata
BolC3t13842H Brassica oleracea
BolC9t58002H Brassica oleracea
BraA03t10499Z Brassica rapa
BraA10t43722Z Brassica rapa
C03p13940 Brassica napus
C09p51420 Brassica napus
CAN.G394.82 Capsicum annuum
CANSAT54G1476 Cannabis sativa
CARHR285400 Cardamine hirsuta
Carub.0008s1981 Capsella rubella
Ca_20611_v3 Cicer arietinum L.
Ca_29565_v3 Cicer arietinum L.
CBR_g20299 Chara braunii
Cc01_g13510 Coffea canephora
CDE02G2526 Ceratophyllum demersum
CDE09G0926 Ceratophyllum demersum
Ciclev10029658m.g Citrus clementina
CiPaw.13G087500 Carya illinoinensis
ClCG03G001200 Citrullus lanatus
Cpa.g.sc81.58 Carica papaya
Cre01.g061442 Chlamydomonas reinhardtii
CsaV3_1G035700 Cucumis sativus L.
CSS0002992 Camellia sinensis var. sinensis
CSS0010627 Camellia sinensis var. sinensis
DCAR_005929 Daucus carota
Dinv34304 Davidia involucrata
Dinv43007 Davidia involucrata
Dinv43090 Davidia involucrata
Duzib150G0367 Durio zibethinus
Duzib168G0895 Durio zibethinus
Duzib168G1854 Durio zibethinus
Duzib170G0534 Durio zibethinus
ECA248G0827 Erigeron canadensis
EL10Ac7g16086 Beta vulgaris
Eucgr.A01573 Eucalyptus grandis
FAN11G0304 Fragaria x ananassa
FAN16G0494 Fragaria x ananassa
FAN21G1946 Fragaria x ananassa
FAN25G1682 Fragaria x ananassa
FvH4_3g37160 Fragaria vesca
Glyma.13G339300 Glycine max
Glyma.15G035100 Glycine max
Gohir.A03G046200 Gossypium hirsutum
Gohir.A13G225700 Gossypium hirsutum
Gohir.D03G120951 Gossypium hirsutum
Gohir.D13G231100 Gossypium hirsutum
Gorai.003G127900 Gossypium raimondii
Gorai.013G261600 Gossypium raimondii
GSVIVG01024863001 Vitis vinifera
HanXRQChr11g0340611 Helianthus annuus
Haze_24201 Corylus avellana
Haze_27721 Corylus avellana
Hma1.2p1_0543F.1_g175400 Hydrangea macrophylla
HPP92_019857 Vanilla planifolia
Hund04909 Selenicereus undatus
Lalb_Chr19g0138001 Lupinus albus
Lj3g0010434 Lotus japonicus
Lsat_1_v5_gn_5_169860 Lactuca sativa
Manes.01G167608 Manihot esculenta
Manes.02G126800 Manihot esculenta
Mapoly0001s0456 Marchantia polymorpha
MBI14_g02873_MAGBIO Magnolia biondii
MCO15G569 Micromonas commoda
MD03G1084600 Malus domestica
MD11G1092100 Malus domestica
Medtr4g064903 Medicago truncatula
MELO3C020599.2 Cucumis melo
Migut.F01279 Erythranthe guttata
Nitab4.5_0000839g0140 Nicotiana tabacum
Nitab4.5_0008156g0010 Nicotiana tabacum
Nn2g11283 Nelumbo nucifera
Oeu002453.3 Olea europaea
Oeu017416.1 Olea europaea
Os11g0707700 Oryza sativa ssp. japonica
Peaxi162Scf00481g00628 Petunia axillaris
PGR031G3365 Punica granatum
PGSC0003DMG400030334 Solanum tuberosum
Phvul.L008443 Phaseolus vulgaris
Potri.009G037800 Populus trichocarpa
Pp3c17_23040 Physcomitrium patens
Pp3c1_40610 Physcomitrium patens
PRCOL_00005420 Prasinoderma coloniale
Prupe.6G067900 Prunus persica
Psat7g211880 Pisum sativum
PSO017G5786 Papaver somniferum
PSO478G4319 Papaver somniferum
QL01p028144 Quercus lobata
RcHm_v2.0_Chr5g0066881 Rosa chinensis
Rhsim13G0076300 Rhododendron simsii
SalBow2G0925 Salvia bowleyana
Sc21g0006090 Simmondsia chinensis
Sed0004662 Sechium edule
Sed0009265 Sechium edule
SEGI_34558 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30156 Striga asiatica
SMO137G0055 Selaginella moellendorffii
Solyc06g076460.4 Solanum lycopersicum
Sopen06g032870 Solanum pennellii
Sp6g20850 Schrenkiella parvula
TAR369G0127 Trochodendron aralioides
THA.LOC104799420 Tarenaya hassleriana
THA.LOC109115974 Tarenaya hassleriana
Thecc.09G312900 Theobroma cacao
Thhalv10015122m.g Eutrema salsugineum
TPR.G23613 Trifolium pratense
TWI79G0668 Tripterygium wilfordii
unitig_60.g25692 Utricularia gibba
vmacro03020 Vaccinium macrocarpon
VMungo1080G0472 Vigna mungo
Zm00001eb371730 Zea mays

User provided reference genes

Program Settings