Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p42610 Brassica napus
A09p05220 Brassica napus
Aa31LG11G9040 Aethionema arabicum
Aa31LG5G15480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.837 Anthoceros agrestis
Actinidia05739 Actinidia chinensis
Actinidia30901 Actinidia chinensis
Ah.04g159940 Amaranthus hybridus
AL3G15310 Arabidopsis lyrata
Aqoxy5G00596 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MWM6LR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QVQE66 Arachis hypogaea
AT3G04970 Arabidopsis thaliana
ATR0487G009 Amborella trichopoda
Atru.chr2.537 Acer truncatum
Atru.chr2.564 Acer truncatum
AUR62000904 Chenopodium quinoa
AUR62005071 Chenopodium quinoa
BcaB04g19660 Brassica carinata
BcaB04g19663 Brassica carinata
BcaC02g11489 Brassica carinata
BcaC04g23685 Brassica carinata
BcaC04g23688 Brassica carinata
BcaC05g29976 Brassica carinata
BolC5t34886H Brassica oleracea
BolC9t53497H Brassica oleracea
BraA05t22992Z Brassica rapa
BraA09t36161Z Brassica rapa
C02p36570 Brassica napus
C04p14840 Brassica napus
C05p62300 Brassica napus
C09p05680 Brassica napus
CAN.G56.14 Capsicum annuum
CANSAT54G0668 Cannabis sativa
CARHR079280 Cardamine hirsuta
CARHR185900 Cardamine hirsuta
Carub.0003s0419 Capsella rubella
Ca_09385_v3 Cicer arietinum L.
Cc02_g32810 Coffea canephora
CDE12G0821 Ceratophyllum demersum
Cfa006515 Carpinus fangiana
Ciclev10001418m.g Citrus clementina
CiPaw.07G012300 Carya illinoinensis
COL.COLO4_13564 Corchorus olitorius
Cpa.g.sc84.114 Carica papaya
Cre02.g090100 Chlamydomonas reinhardtii
CsaV3_3G003940 Cucumis sativus L.
CSS0017417 Camellia sinensis var. sinensis
Dinv22927 Davidia involucrata
Dinv40230 Davidia involucrata
Duzib128G0205 Durio zibethinus
Duzib192G0784 Durio zibethinus
Duzib192G0855 Durio zibethinus
Duzib192G0912 Durio zibethinus
Duzib192G0979 Durio zibethinus
ECA232G3849 Erigeron canadensis
EL10Ac4g09284 Beta vulgaris
Eucgr.B02032 Eucalyptus grandis
FAN05G2497 Fragaria x ananassa
FAN05G4189 Fragaria x ananassa
FAN09G3845 Fragaria x ananassa
FAN14G1317 Fragaria x ananassa
FAN14G2574 Fragaria x ananassa
FvH4_6g04920 Fragaria vesca
Glyma.03G242000 Glycine max
Glyma.19G239400 Glycine max
Gohir.A13G172200 Gossypium hirsutum
Gohir.D13G178100 Gossypium hirsutum
Gorai.004G244300 Gossypium raimondii
Gorai.013G203400 Gossypium raimondii
GSVIVG01022009001 Vitis vinifera
HanXRQChr09g0254601 Helianthus annuus
Haze_04267 Corylus avellana
Hma1.2p1_0071F.1_g037960 Hydrangea macrophylla
HPP92_003153 Vanilla planifolia
Hund07023 Selenicereus undatus
Lalb_Chr15g0077001 Lupinus albus
Lj1g0003731 Lotus japonicus
Lj9A677G37 Lonicera japonica
Lj9A680G39 Lonicera japonica
Lsat_1_v5_gn_4_139320 Lactuca sativa
Manes.08G125000 Manihot esculenta
Mapoly0004s0142 Marchantia polymorpha
MCO05G448 Micromonas commoda
MD04G1213200 Malus domestica
MD12G1227400 Malus domestica
Medtr7g114080 Medicago truncatula
MELO3C014079.2 Cucumis melo
Migut.L01513 Erythranthe guttata
MSTRG.10544 Avicennia marina
Nitab4.5_0000176g0130 Nicotiana tabacum
Nitab4.5_0000176g0140 Nicotiana tabacum
Nitab4.5_0005924g0010 Nicotiana tabacum
Nitab4.5_0005924g0020 Nicotiana tabacum
Nn4g26084 Nelumbo nucifera
Oeu052135.1 Olea europaea
Os03g0363900 Oryza sativa ssp. japonica
Peaxi162Scf00071g00714 Petunia axillaris
PGR031G1977 Punica granatum
Phvul.006G096000 Phaseolus vulgaris
Potri.005G041000 Populus trichocarpa
Pp3c9_17640 Physcomitrium patens
PRCOL_00005730 Prasinoderma coloniale
Prupe.6G333100 Prunus persica
Psat3g009240 Pisum sativum
PSO210G2121 Papaver somniferum
PSO832G1738 Papaver somniferum
QL03p002925 Quercus lobata
QL03p003187 Quercus lobata
QL03p003516 Quercus lobata
RcHm_v2.0_Chr3g0453421 Rosa chinensis
Rhsim07G0178000 Rhododendron simsii
Sabra05G0040000 Salix brachista
Sc06g0003460 Simmondsia chinensis
SEGI_36862 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09411 Striga asiatica
SMO356G0262 Selaginella moellendorffii
Solyc08g029200.3 Solanum lycopersicum
Sopen08g010120 Solanum pennellii
Sp2g20520 Schrenkiella parvula
Sp3g03790 Schrenkiella parvula
TAR362G0076 Trochodendron aralioides
THA.LOC104802814 Tarenaya hassleriana
THA.LOC104818669 Tarenaya hassleriana
Thecc.05G296800 Theobroma cacao
Thhalv10004370m.g Eutrema salsugineum
Thhalv10020879m.g Eutrema salsugineum
TPR.G21789 Trifolium pratense
TWI36G0483 Tripterygium wilfordii
unitig_578.g16415 Utricularia gibba
vmacro05048 Vaccinium macrocarpon
VMungo0540G0326 Vigna mungo
Zm00001eb394310 Zea mays

User provided reference genes

Program Settings