Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p00900 Brassica napus
A10p05890 Brassica napus
Aa31LG1G6580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3555 Anthoceros agrestis
Actinidia23896 Actinidia chinensis
Actinidia34449 Actinidia chinensis
Ah.08g220770 Amaranthus hybridus
AL1G17470 Arabidopsis lyrata
AL3G45690 Arabidopsis lyrata
Aqoxy4G02659 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MB6FU1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PIAF8F Arachis hypogaea
AT1G07320 Arabidopsis thaliana
ATR0618G074 Amborella trichopoda
Atru.chr3.4076 Acer truncatum
AUR62001682 Chenopodium quinoa
AUR62020100 Chenopodium quinoa
BcaC01g03729 Brassica carinata
BcaC04g22283 Brassica carinata
BcaC07g40681 Brassica carinata
BcaC07g42461 Brassica carinata
BolC1t04043H Brassica oleracea
BolC3t17204H Brassica oleracea
BolC5t29311H Brassica oleracea
BolC8t51258H Brassica oleracea
BraA10t42851Z Brassica rapa
C01p40880 Brassica napus
C03p49220 Brassica napus
C03p78990 Brassica napus
C05p05390 Brassica napus
C08p36790 Brassica napus
CAN.G375.78 Capsicum annuum
CAN.G375.79 Capsicum annuum
CANSAT54G1024 Cannabis sativa
CARHR007030 Cardamine hirsuta
Carub.0001s0662 Capsella rubella
Ca_25798_v3 Cicer arietinum L.
CBR_g17149 Chara braunii
Cc01_g13960 Coffea canephora
CDE06G2541 Ceratophyllum demersum
CDE07G0691 Ceratophyllum demersum
Cfa011659 Carpinus fangiana
Ciclev10028981m.g Citrus clementina
CiPaw.14G061000 Carya illinoinensis
ClCG02G019690 Citrullus lanatus
ClCG06G015810 Citrullus lanatus
COL.COLO4_19111 Corchorus olitorius
Cpa.g.sc112.52 Carica papaya
Cre11.g479500 Chlamydomonas reinhardtii
CsaV3_6G016380 Cucumis sativus L.
CSS0008565 Camellia sinensis var. sinensis
Dinv14463 Davidia involucrata
Duzib168G1043 Durio zibethinus
ECA248G3182 Erigeron canadensis
EL10Ac7g16129 Beta vulgaris
Eucgr.J01939 Eucalyptus grandis
FAN11G1028 Fragaria x ananassa
FAN16G1585 Fragaria x ananassa
FAN21G3245 Fragaria x ananassa
FvH4_3g38221 Fragaria vesca
Glyma.03G110100 Glycine max
Glyma.07G114900 Glycine max
Gohir.A08G002100 Gossypium hirsutum
Gohir.D08G012800 Gossypium hirsutum
Gorai.004G006900 Gossypium raimondii
GSVIVG01024788001 Vitis vinifera
HanXRQChr01g0011361 Helianthus annuus
Haze_24262 Corylus avellana
Hma1.2p1_1010F.1_g247380 Hydrangea macrophylla
HPP92_014295 Vanilla planifolia
Hund18857 Selenicereus undatus
Lalb_Chr12g0210551 Lupinus albus
Lj1A141T52 Lonicera japonica
Lj3g0000632 Lotus japonicus
Lsat_1_v5_gn_5_172301 Lactuca sativa
Manes.01G164100 Manihot esculenta
Mapoly0001s0232 Marchantia polymorpha
MBI05_g03471_MAGBIO Magnolia biondii
MCO16G079 Micromonas commoda
MD03G1073800 Malus domestica
MD08G1127500 Malus domestica
MD11G1079800 Malus domestica
MD11G1080100 Malus domestica
Medtr8g006995 Medicago truncatula
MELO3C025869.2 Cucumis melo
Migut.N00890 Erythranthe guttata
MSTRG.17870 Avicennia marina
Nitab4.5_0000325g0040 Nicotiana tabacum
Nitab4.5_0000918g0030 Nicotiana tabacum
Nn2g11395 Nelumbo nucifera
Nn2g13627 Nelumbo nucifera
Oeu045518.2 Olea europaea
Os03g0265400 Oryza sativa ssp. japonica
Peaxi162Scf00003g04831 Petunia axillaris
PGR119G2098 Punica granatum
PGSC0003DMG400007051 Solanum tuberosum
Phvul.010G048100 Phaseolus vulgaris
Potri.006G221100 Populus trichocarpa
Pp3c23_4120 Physcomitrium patens
Pp3c24_10220 Physcomitrium patens
Pp3c8_21780 Physcomitrium patens
PRCOL_00005683 Prasinoderma coloniale
Prupe.6G060600 Prunus persica
Psat4g224360 Pisum sativum
PSO339G6296 Papaver somniferum
PSO384G4655 Papaver somniferum
QL01p026804 Quercus lobata
RcHm_v2.0_Chr5g0068671 Rosa chinensis
RcHm_v2.0_Chr5g0068721 Rosa chinensis
Rhsim01G0235400 Rhododendron simsii
Sabra06G0170900 Salix brachista
SalBow2G3036 Salvia bowleyana
Sc06g0008430 Simmondsia chinensis
Sed0018549 Sechium edule
Sed0022906 Sechium edule
SEGI_15715 Sequoiadendron giganteum
SGA_v2.0_scaffold161G37856 Striga asiatica
SMO347G0310 Selaginella moellendorffii
Solyc07g061900.3 Solanum lycopersicum
Sopen07g030180 Solanum pennellii
Sp1g06070 Schrenkiella parvula
TAR369G0221 Trochodendron aralioides
TAR369G0416 Trochodendron aralioides
THA.LOC104808420 Tarenaya hassleriana
THA.LOC104826298 Tarenaya hassleriana
Thecc.09G305200 Theobroma cacao
Thhalv10008395m.g Eutrema salsugineum
TPR.G33123 Trifolium pratense
TWI75G1308 Tripterygium wilfordii
unitig_0.g444 Utricularia gibba
vmacro14583 Vaccinium macrocarpon
VMungo0331G0535 Vigna mungo
Zm00001eb011760 Zea mays

User provided reference genes

Program Settings