Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p11480 Brassica napus
A09p37960 Brassica napus
Aa31sc1106G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1764 Anthoceros agrestis
Actinidia09599 Actinidia chinensis
Actinidia34002 Actinidia chinensis
Ah.03g135600 Amaranthus hybridus
AL1G41620 Arabidopsis lyrata
Aqoxy5G03171 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3C70LE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WRPQ8T Arachis hypogaea
AT1G28100 Arabidopsis thaliana
ATR0829G022 Amborella trichopoda
Atru.chr11.2424 Acer truncatum
AUR62005704 Chenopodium quinoa
BcaB03g13954 Brassica carinata
BcaB07g32415 Brassica carinata
BcaC05g26813 Brassica carinata
BcaC05g26814 Brassica carinata
BcaC06g35333 Brassica carinata
BolC5t31401H Brassica oleracea
BolC7t42232H Brassica oleracea
BraA07t28937Z Brassica rapa
BraA09t39308Z Brassica rapa
C05p26800 Brassica napus
C07p17290 Brassica napus
CANSAT01G1948 Cannabis sativa
CARHR027570 Cardamine hirsuta
Carub.0001s2653 Capsella rubella
Ca_03922_v3 Cicer arietinum L.
CBR_g3946 Chara braunii
Cc11_g15130 Coffea canephora
CDE05G0434 Ceratophyllum demersum
Ciclev10032244m.g Citrus clementina
CiPaw.05G102600 Carya illinoinensis
ClCG07G011870 Citrullus lanatus
COL.COLO4_06414 Corchorus olitorius
COL.COLO4_06415 Corchorus olitorius
Cpa.g.sc498.3 Carica papaya
Cre03.g194450 Chlamydomonas reinhardtii
CsaV3_4G002340 Cucumis sativus L.
CSS0039203 Camellia sinensis var. sinensis
Dinv19137 Davidia involucrata
Duzib052G0289 Durio zibethinus
Duzib132G0160 Durio zibethinus
ECA233G2015 Erigeron canadensis
EL10Ac6g13596 Beta vulgaris
Eucgr.B03550 Eucalyptus grandis
FvH4_4g22830 Fragaria vesca
Glyma.12G234900 Glycine max
Glyma.13G264200 Glycine max
Gohir.A03G152800 Gossypium hirsutum
Gohir.D02G175000 Gossypium hirsutum
Gorai.005G196600 Gossypium raimondii
GSVIVG01004938001 Vitis vinifera
HanXRQChr08g0210391 Helianthus annuus
HanXRQChr08g0210441 Helianthus annuus
HanXRQChr12g0363371 Helianthus annuus
Haze_12488 Corylus avellana
Hma1.2p1_1834F.1_g304595 Hydrangea macrophylla
HPP92_000723 Vanilla planifolia
Hund16125 Selenicereus undatus
Hund16126 Selenicereus undatus
Lalb_Chr25g0285611 Lupinus albus
Lj3g0004461 Lotus japonicus
Lj6A836G36 Lonicera japonica
Lsat_1_v5_gn_4_151180 Lactuca sativa
Manes.08G102300 Manihot esculenta
Manes.09G187100 Manihot esculenta
Mapoly0153s0008 Marchantia polymorpha
MCO09G131 Micromonas commoda
MD13G1129300 Malus domestica
MD16G1129300 Malus domestica
Medtr2g072940 Medicago truncatula
MELO3C017808.2 Cucumis melo
Migut.K01072 Erythranthe guttata
Migut.K01073 Erythranthe guttata
Migut.K01074 Erythranthe guttata
Migut.K01075 Erythranthe guttata
Migut.K01076 Erythranthe guttata
Migut.K01077 Erythranthe guttata
Migut.O00624 Erythranthe guttata
MSTRG.8047 Avicennia marina
MSTRG.8048 Avicennia marina
Nitab4.5_0000608g0060 Nicotiana tabacum
Nitab4.5_0002899g0010 Nicotiana tabacum
Nn4g22166 Nelumbo nucifera
Oeu019435.1 Olea europaea
Oeu044507.2 Olea europaea
Os10g0499600 Oryza sativa ssp. japonica
Peaxi162Scf00128g01773 Petunia axillaris
PGR102G3220 Punica granatum
PGSC0003DMG400014477 Solanum tuberosum
Phvul.005G075700 Phaseolus vulgaris
Potri.001G066000 Populus trichocarpa
Potri.003G163800 Populus trichocarpa
Pp3c14_11090 Physcomitrium patens
Pp3c14_12070 Physcomitrium patens
PRCOL_00000815 Prasinoderma coloniale
Prupe.1G217100 Prunus persica
Psat1g007680 Pisum sativum
PSO017G3988 Papaver somniferum
PSO478G4440 Papaver somniferum
QL03p049767 Quercus lobata
QL03p049770 Quercus lobata
RcHm_v2.0_Chr4g0429061 Rosa chinensis
Rhsim12G0098100 Rhododendron simsii
Sabra01G0045900 Salix brachista
Sabra03G0119100 Salix brachista
SalBow2G1918 Salvia bowleyana
SalBow7G3994 Salvia bowleyana
Sc04g0000040 Simmondsia chinensis
Sc04g0000050 Simmondsia chinensis
Sc04g0000090 Simmondsia chinensis
Sc04g0000100 Simmondsia chinensis
Sed0007329 Sechium edule
Sed0028093 Sechium edule
SEGI_05009 Sequoiadendron giganteum
SGA_v2.0_scaffold201G41354 Striga asiatica
SMO115G0111 Selaginella moellendorffii
Solyc12g041880.2 Solanum lycopersicum
Sopen12g020650 Solanum pennellii
Sp1g24290 Schrenkiella parvula
TAR622G0237 Trochodendron aralioides
THA.LOC104820535 Tarenaya hassleriana
Thecc.02G194400 Theobroma cacao
Thhalv10008411m.g Eutrema salsugineum
TPR.G35001 Trifolium pratense
TWI36G0175 Tripterygium wilfordii
unitig_26.g10430 Utricularia gibba
vmacro16076 Vaccinium macrocarpon
VMungo1080G1469 Vigna mungo
Zm00001eb044420 Zea mays

User provided reference genes

Program Settings