Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01670 Brassica napus
A10p25130 Brassica napus
Aa31LG3G14590 Aethionema arabicum
Actinidia16309 Actinidia chinensis
Actinidia28459 Actinidia chinensis
Ah.04g161870 Amaranthus hybridus
Ah.06g193630 Amaranthus hybridus
AL6G23670 Arabidopsis lyrata
Aqoxy1G00241 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea
AT5G13070 Arabidopsis thaliana
ATR0605G298 Amborella trichopoda
Atru.chr3.2589 Acer truncatum
AUR62000096 Chenopodium quinoa
AUR62019269 Chenopodium quinoa
BcaNung01174 Brassica carinata
BcaNung01858 Brassica carinata
BolC2t06533H Brassica oleracea
BolC9t59241H Brassica oleracea
BraA02t05146Z Brassica rapa
BraA10t44575Z Brassica rapa
C02p05880 Brassica napus
C09p64030 Brassica napus
CAN.G575.64 Capsicum annuum
CANSAT54G1708 Cannabis sativa
CARHR200400 Cardamine hirsuta
Carub.0006s1124 Capsella rubella
Ca_01285_v3 Cicer arietinum L.
CBR_g20418 Chara braunii
Cc01_g01980 Coffea canephora
Cfa009733 Carpinus fangiana
Cfa009734 Carpinus fangiana
Ciclev10016610m.g Citrus clementina
CiPaw.13G163500 Carya illinoinensis
CiPaw.13G163600 Carya illinoinensis
ClCG03G013300 Citrullus lanatus
COL.COLO4_24845 Corchorus olitorius
Cpa.g.sc84.80 Carica papaya
CsaV3_1G042730 Cucumis sativus L.
CSS0048722 Camellia sinensis var. sinensis
DCAR_002056 Daucus carota
Dinv08036 Davidia involucrata
Dinv36283 Davidia involucrata
Duzib150G0087 Durio zibethinus
Duzib168G0296 Durio zibethinus
ECA238G1591 Erigeron canadensis
EL10Ac4g10299 Beta vulgaris
Eucgr.J00791 Eucalyptus grandis
FAN11G1123 Fragaria x ananassa
FAN16G1279 Fragaria x ananassa
FAN21G2433 Fragaria x ananassa
FAN25G0812 Fragaria x ananassa
FvH4_3g43090 Fragaria vesca
Glyma.15G033100 Glycine max
Gohir.A05G068300 Gossypium hirsutum
Gohir.D05G071300 Gossypium hirsutum
Gorai.009G072300 Gossypium raimondii
GSVIVG01025306001 Vitis vinifera
HanXRQChr02g0036871 Helianthus annuus
HanXRQChr14g0453051 Helianthus annuus
Haze_23087 Corylus avellana
HPP92_022794 Vanilla planifolia
Lalb_Chr14g0372181 Lupinus albus
Lj2P647T17 Lonicera japonica
Lj3g0003495 Lotus japonicus
Lsat_1_v5_gn_2_100781 Lactuca sativa
Manes.06G166900 Manihot esculenta
Mapoly0008s0230 Marchantia polymorpha
Mapoly0061s0125 Marchantia polymorpha
MBI01_g27622_MAGBIO Magnolia biondii
MBI17_g30524_MAGBIO Magnolia biondii
MD03G1024000 Malus domestica
MD11G1028900 Malus domestica
Medtr1g058050 Medicago truncatula
Medtr2g017985 Medicago truncatula
Medtr2g098170 Medicago truncatula
Medtr8g096810 Medicago truncatula
MELO3C015200.2 Cucumis melo
Migut.D00576 Erythranthe guttata
Migut.N02304 Erythranthe guttata
MSTRG.17581 Avicennia marina
MSTRG.21396 Avicennia marina
Nitab4.5_0001925g0100 Nicotiana tabacum
Nitab4.5_0002766g0030 Nicotiana tabacum
Nitab4.5_0008647g0010 Nicotiana tabacum
Nitab4.5_0008868g0020 Nicotiana tabacum
Nn2g15416 Nelumbo nucifera
Oeu035742.1 Olea europaea
Oeu052048.1 Olea europaea
Os02g0717900 Oryza sativa ssp. japonica
Os09g0486000 Oryza sativa ssp. japonica
Peaxi162Scf00029g00326 Petunia axillaris
PGR119G1510 Punica granatum
PGSC0003DMG400013588 Solanum tuberosum
PGSC0003DMG400023838 Solanum tuberosum
Phvul.L010243 Phaseolus vulgaris
Potri.001G018500 Populus trichocarpa
Pp3c14_26010 Physcomitrium patens
Pp3c1_37310 Physcomitrium patens
Prupe.6G023200 Prunus persica
Psat5g287440 Pisum sativum
PSO339G4569 Papaver somniferum
PSO384G4422 Papaver somniferum
QL01p005297 Quercus lobata
QL01p005337 Quercus lobata
RcHm_v2.0_Chr5g0077191 Rosa chinensis
Rhsim13G0224100 Rhododendron simsii
Sabra01G0013100 Salix brachista
SalBow4G0034 Salvia bowleyana
SalBow4G1382 Salvia bowleyana
Sc06g0004490 Simmondsia chinensis
Sed0004394 Sechium edule
SGA_v2.0_scaffold8G04610 Striga asiatica
SHI29727 Sapria himalayana
SMO147G0033 Selaginella moellendorffii
Solyc11g061760.3 Solanum lycopersicum
Solyc12g100050.2 Solanum lycopersicum
Sopen11g023660 Solanum pennellii
Sopen12g034670 Solanum pennellii
Sp6g30910 Schrenkiella parvula
TAR633G2552 Trochodendron aralioides
TAR636G0304 Trochodendron aralioides
THA.LOC104804975 Tarenaya hassleriana
Thecc.09G227900 Theobroma cacao
Thhalv10014788m.g Eutrema salsugineum
TPR.G6870 Trifolium pratense
TWI34G0922 Tripterygium wilfordii
TWI60G1455 Tripterygium wilfordii
unitig_21.g20645 Utricularia gibba
VMungo1080G0295 Vigna mungo
Zm00001eb189280 Zea mays
Zm00001eb316590 Zea mays

User provided reference genes

Program Settings