Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31sc26G90 Aethionema arabicum
Aa31sc46G40 Aethionema arabicum
Actinidia08108 Actinidia chinensis
Actinidia30696 Actinidia chinensis
Actinidia35403 Actinidia chinensis
Actinidia37152 Actinidia chinensis
Aqoxy3G01339 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.11ED70 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9BU9L2 Arachis hypogaea
ATR0751G078 Amborella trichopoda
ATR0824G200 Amborella trichopoda
Atru.chr11.2201 Acer truncatum
Atru.chr2.3697 Acer truncatum
CANSAT01G3281 Cannabis sativa
CANSAT78G1634 Cannabis sativa
CARHR174360 Cardamine hirsuta
Ca_02000_v3 Cicer arietinum L.
Cc05_g15010 Coffea canephora
CDE02G3774 Ceratophyllum demersum
Cfa009271 Carpinus fangiana
Ciclev10008896m.g Citrus clementina
Ciclev10030561m.g Citrus clementina
CiPaw.11G070600 Carya illinoinensis
ClCG08G017500 Citrullus lanatus
COL.COLO4_09843 Corchorus olitorius
COL.COLO4_23547 Corchorus olitorius
Cpa.g.sc12.119 Carica papaya
Cpa.g.sc369.5 Carica papaya
Cpa.g.sc369.6 Carica papaya
CsaV3_2G025110 Cucumis sativus L.
DCAR_001919 Daucus carota
DCAR_024069 Daucus carota
Dinv10342 Davidia involucrata
Dinv14763 Davidia involucrata
Duzib213G0291 Durio zibethinus
Duzib251G0242 Durio zibethinus
Duzib268G1590 Durio zibethinus
Eucgr.B03235 Eucalyptus grandis
Eucgr.F03684 Eucalyptus grandis
FAN07G0148 Fragaria x ananassa
FAN12G0897 Fragaria x ananassa
FAN17G1935 Fragaria x ananassa
FAN22G1084 Fragaria x ananassa
FAN22G1483 Fragaria x ananassa
FvH4_4g25060 Fragaria vesca
Glyma.09G051600 Glycine max
Glyma.15G157900 Glycine max
Gohir.A03G131400 Gossypium hirsutum
Gohir.A13G132200 Gossypium hirsutum
Gohir.D02G155300 Gossypium hirsutum
Gohir.D13G135600 Gossypium hirsutum
Gorai.005G174200 Gossypium raimondii
Gorai.013G152000 Gossypium raimondii
GSVIVG01000596001 Vitis vinifera
GSVIVG01014696001 Vitis vinifera
HanXRQChr01g0023571 Helianthus annuus
HanXRQChr08g0208041 Helianthus annuus
HanXRQChr11g0334111 Helianthus annuus
Haze_12305 Corylus avellana
Hma1.2p1_0815F.1_g222840 Hydrangea macrophylla
Hma1.2p1_2829F.1_g329210 Hydrangea macrophylla
HPP92_007696 Vanilla planifolia
HPP92_027528 Vanilla planifolia
Hund23103 Selenicereus undatus
Lalb_Chr11g0075601 Lupinus albus
Lalb_Chr18g0052131 Lupinus albus
Lj6A818T39 Lonicera japonica
Lj6g0020676 Lotus japonicus
Lsat_1_v5_gn_4_112241 Lactuca sativa
Lsat_1_v5_gn_7_114301 Lactuca sativa
Lsat_1_v5_gn_8_150460 Lactuca sativa
Manes.02G222900 Manihot esculenta
Manes.12G018600 Manihot esculenta
Manes.13G019100 Manihot esculenta
MBI14_g22553_MAGBIO Magnolia biondii
MD13G1106900 Malus domestica
MD16G1107000 Malus domestica
Medtr2g036070 Medicago truncatula
MELO3C010709.2 Cucumis melo
Migut.A01086 Erythranthe guttata
Migut.K00651 Erythranthe guttata
MSTRG.544 Avicennia marina
MSTRG.7960 Avicennia marina
Nitab4.5_0001159g0240 Nicotiana tabacum
Nitab4.5_0006876g0020 Nicotiana tabacum
Nn1g07525 Nelumbo nucifera
Nn4g22491 Nelumbo nucifera
Peaxi162Scf01762g00013 Petunia axillaris
PGR031G0790 Punica granatum
PGR031G1574 Punica granatum
PGR102G1092 Punica granatum
Phvul.009G242100 Phaseolus vulgaris
Potri.005G066950 Populus trichocarpa
Potri.007G102500 Populus trichocarpa
Potri.010G052200 Populus trichocarpa
Prupe.1G239400 Prunus persica
Psat1g149600 Pisum sativum
PSO339G2613 Papaver somniferum
PSO339G3984 Papaver somniferum
PSO384G2180 Papaver somniferum
PSO384G3490 Papaver somniferum
QL03p055923 Quercus lobata
RcHm_v2.0_Chr4g0432241 Rosa chinensis
Rhsim04G0012300 Rhododendron simsii
Rhsim10G0199200 Rhododendron simsii
Rhsim10G0199400 Rhododendron simsii
Rhsim10G0204100 Rhododendron simsii
Rhsim12G0037600 Rhododendron simsii
Sabra07G0084200 Salix brachista
Sabra10G0018100 Salix brachista
SalBow2G2700 Salvia bowleyana
SalBow6G1550 Salvia bowleyana
SalBow8G3261 Salvia bowleyana
Sc14g0008880 Simmondsia chinensis
Sc16g0008130 Simmondsia chinensis
Sed0006554 Sechium edule
Sed0020016 Sechium edule
SEGI_35034 Sequoiadendron giganteum
SGA_v2.0_scaffold124G33641 Striga asiatica
SGA_v2.0_scaffold140G35473 Striga asiatica
SGA_v2.0_scaffold171G38860 Striga asiatica
TAR629G0397 Trochodendron aralioides
TAR629G1344 Trochodendron aralioides
THA.LOC104825539 Tarenaya hassleriana
Thecc.02G268600 Theobroma cacao
Thecc.07G012300 Theobroma cacao
TPR.G1682 Trifolium pratense
TPR.G1700 Trifolium pratense
TWI36G0003 Tripterygium wilfordii
TWI38G1195 Tripterygium wilfordii
vmacro01106 Vaccinium macrocarpon
vmacro09646 Vaccinium macrocarpon
Zm00001eb165220 Zea mays

User provided reference genes

Program Settings