Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p31680 Brassica napus
Aa31LG8G4960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2098 Anthoceros agrestis
Actinidia34295 Actinidia chinensis
Ah.07g202930 Amaranthus hybridus
Ah.07g202940 Amaranthus hybridus
AL3G31270 Arabidopsis lyrata
Aqoxy1G00072 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B0Y075 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LMCB5G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UAU06L Arachis hypogaea
AT3G18110 Arabidopsis thaliana
ATR0568G095 Amborella trichopoda
Atru.chr12.1739 Acer truncatum
Atru.chr12.2038 Acer truncatum
Atru.chr12.2039 Acer truncatum
AUR62002419 Chenopodium quinoa
AUR62021709 Chenopodium quinoa
AUR62023769 Chenopodium quinoa
BcaC05g28669 Brassica carinata
BcaC05g28673 Brassica carinata
BcaC05g28674 Brassica carinata
BolC5t33451H Brassica oleracea
BolC5t33517H Brassica oleracea
BolC5t33524H Brassica oleracea
BolC5t33548H Brassica oleracea
BraA05t22001Z Brassica rapa
C05p47250 Brassica napus
C05p48080 Brassica napus
CAN.G303.67 Capsicum annuum
CANSAT11G1786 Cannabis sativa
CARHR093420 Cardamine hirsuta
Carub.0003s1784 Capsella rubella
Ca_24470_v3 Cicer arietinum L.
CBR_g41643 Chara braunii
CBR_g49306 Chara braunii
Cc11_g03910 Coffea canephora
CDE01G0240 Ceratophyllum demersum
CDE12G0098 Ceratophyllum demersum
Cfa013617 Carpinus fangiana
Ciclev10013854m.g Citrus clementina
CiPaw.08G043700 Carya illinoinensis
COL.COLO4_08905 Corchorus olitorius
Cpa.g.sc39.46 Carica papaya
Cpa.g.sc39.47 Carica papaya
CsaV3_6G018920 Cucumis sativus L.
CSS0041877 Camellia sinensis var. sinensis
DCAR_006500 Daucus carota
Dinv29179 Davidia involucrata
Duzib177G0812 Durio zibethinus
ECA232G4753 Erigeron canadensis
EL10Ac3g06117 Beta vulgaris
Eucgr.A02953 Eucalyptus grandis
FAN07G2680 Fragaria x ananassa
FAN12G1215 Fragaria x ananassa
FAN12G4319 Fragaria x ananassa
FAN17G0149 Fragaria x ananassa
FvH4_4g17300 Fragaria vesca
Glyma.09G286400 Glycine max
Glyma.11G013700 Glycine max
Gohir.A02G138900 Gossypium hirsutum
Gohir.D03G049400 Gossypium hirsutum
Gorai.003G050800 Gossypium raimondii
GSVIVG01024457001 Vitis vinifera
HanXRQChr04g0111711 Helianthus annuus
Haze_22244 Corylus avellana
HPP92_002379 Vanilla planifolia
HPP92_027606 Vanilla planifolia
Hund09764 Selenicereus undatus
Lalb_Chr25g0279841 Lupinus albus
Lj2A679T10 Lonicera japonica
Lj2A685T11 Lonicera japonica
Lj2C679T3 Lonicera japonica
Lj2C685T2 Lonicera japonica
LjContig00222g0010720 Lotus japonicus
Lsat_1_v5_gn_9_47361 Lactuca sativa
Manes.08G165200 Manihot esculenta
Mapoly0029s0090 Marchantia polymorpha
Mapoly0068s0065 Marchantia polymorpha
MBI04_g30800_MAGBIO Magnolia biondii
MBI10_g16708_MAGBIO Magnolia biondii
MD07G1304500 Malus domestica
Medtr5g008300 Medicago truncatula
MELO3C025691.2 Cucumis melo
Migut.F00109 Erythranthe guttata
MSTRG.26941 Avicennia marina
Nitab4.5_0000021g0260 Nicotiana tabacum
Nitab4.5_0002302g0060 Nicotiana tabacum
Nn3g19139 Nelumbo nucifera
Oeu055444.1 Olea europaea
Os06g0199100 Oryza sativa ssp. japonica
Peaxi162Scf01650g00056 Petunia axillaris
PGR042G0369 Punica granatum
PGSC0003DMG400000542 Solanum tuberosum
Phvul.002G036500 Phaseolus vulgaris
Potri.007G123900 Populus trichocarpa
Potri.017G036400 Populus trichocarpa
Pp3c17_6450 Physcomitrium patens
Pp3c25_7340 Physcomitrium patens
Pp3c4_14490 Physcomitrium patens
Pp3c5_21760 Physcomitrium patens
Pp3c6_11500 Physcomitrium patens
Prupe.6G174500 Prunus persica
Psat2g187320 Pisum sativum
PSO063G7658 Papaver somniferum
QL09p026590 Quercus lobata
RcHm_v2.0_Chr4g0421271 Rosa chinensis
Rhsim03G0219600 Rhododendron simsii
Sabra07G0100300 Salix brachista
SalBow4G1238 Salvia bowleyana
SalBow4G3068 Salvia bowleyana
Sc25g0001110 Simmondsia chinensis
Sed0009679 Sechium edule
SEGI_36659 Sequoiadendron giganteum
SEGI_40805 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16880 Striga asiatica
SMO111G0190 Selaginella moellendorffii
SMO356G0443 Selaginella moellendorffii
Solyc03g096830.4 Solanum lycopersicum
Sopen03g027570 Solanum pennellii
Sp3g16230 Schrenkiella parvula
Sp6g08520 Schrenkiella parvula
TAR375G0634 Trochodendron aralioides
TAR375G0975 Trochodendron aralioides
THA.LOC104820358 Tarenaya hassleriana
Thecc.05G207900 Theobroma cacao
Thhalv10019896m.g Eutrema salsugineum
TPR.G37938 Trifolium pratense
TWI60G0141 Tripterygium wilfordii
unitig_747.g21705 Utricularia gibba
vmacro06486 Vaccinium macrocarpon
VMungo1215G3088 Vigna mungo
Zm00001eb373900 Zea mays

User provided reference genes

Program Settings