Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p08210 Brassica napus
A10p15140 Brassica napus
Aa31LG3G13600 Aethionema arabicum
Actinidia02640 Actinidia chinensis
Actinidia20954 Actinidia chinensis
Ah.09g229510 Amaranthus hybridus
Ah.14g084110 Amaranthus hybridus
AL8G33800 Arabidopsis lyrata
Aqoxy5G02254 Aquilegia oxysepala
Aqoxy7G03242 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.67VYHR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TG9B3Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UAF1LX Arachis hypogaea
AT5G57770 Arabidopsis thaliana
ATR0580G055 Amborella trichopoda
Atru.chr7.494 Acer truncatum
AUR62028410 Chenopodium quinoa
AUR62039752 Chenopodium quinoa
BcaB05g22372 Brassica carinata
BcaB05g22374 Brassica carinata
BcaB08g36140 Brassica carinata
BcaB08g36142 Brassica carinata
BcaC03g18564 Brassica carinata
BcaC03g18565 Brassica carinata
BcaC04g19930 Brassica carinata
BolC2t07506H Brassica oleracea
BolC9t57817H Brassica oleracea
BraA02t05894Z Brassica rapa
BraA10t43597Z Brassica rapa
C02p13870 Brassica napus
C09p49650 Brassica napus
CAN.G1870.1 Capsicum annuum
CANSAT11G0936 Cannabis sativa
CARHR271500 Cardamine hirsuta
Carub.0008s1828 Capsella rubella
Ca_02726_v3 Cicer arietinum L.
Ca_08199_v3 Cicer arietinum L.
Ca_21182_v3 Cicer arietinum L.
Ca_27863_v3 Cicer arietinum L.
Ca_28181_v3 Cicer arietinum L.
Ca_28411_v3 Cicer arietinum L.
Cc06_g14020 Coffea canephora
Cfa013549 Carpinus fangiana
Ciclev10008554m.g Citrus clementina
CiPaw.08G040300 Carya illinoinensis
CiPaw.08G172300 Carya illinoinensis
ClCG06G012900 Citrullus lanatus
COL.COLO4_04533 Corchorus olitorius
Cpa.g.sc75.19 Carica papaya
CsaV3_1G029470 Cucumis sativus L.
CSS0006326 Camellia sinensis var. sinensis
DCAR_017943 Daucus carota
Dinv41306 Davidia involucrata
Dinv42786 Davidia involucrata
Dinv43315 Davidia involucrata
Duzib168G1554 Durio zibethinus
Duzib187G2004 Durio zibethinus
ECA234G1989 Erigeron canadensis
EL10Ac8g18869 Beta vulgaris
Eucgr.C00211 Eucalyptus grandis
FAN07G0488 Fragaria x ananassa
FAN12G2717 Fragaria x ananassa
FAN12G2910 Fragaria x ananassa
FAN17G1719 Fragaria x ananassa
FAN22G1041 Fragaria x ananassa
FvH4_4g09670 Fragaria vesca
Glyma.13G091600 Glycine max
Glyma.17G068700 Glycine max
Gohir.A05G345842 Gossypium hirsutum
Gohir.A08G096524 Gossypium hirsutum
Gohir.D04G086000 Gossypium hirsutum
Gohir.D08G097150 Gossypium hirsutum
Gorai.004G103900 Gossypium raimondii
Gorai.012G096000 Gossypium raimondii
GSVIVG01023724001 Vitis vinifera
GSVIVG01023744001 Vitis vinifera
HanXRQChr10g0306461 Helianthus annuus
HanXRQChr12g0358041 Helianthus annuus
Haze_22170 Corylus avellana
Hma1.2p1_1531F.1_g289239 Hydrangea macrophylla
Hund08985 Selenicereus undatus
Hund08986 Selenicereus undatus
Hund26407 Selenicereus undatus
Lalb_Chr07g0180081 Lupinus albus
Lalb_Chr07g0180091 Lupinus albus
Lalb_Chr12g0199051 Lupinus albus
Lalb_Chr18g0049831 Lupinus albus
Lalb_Chr18g0049841 Lupinus albus
Lj4g0010700 Lotus japonicus
Lj9A728G21 Lonicera japonica
Lsat_1_v5_gn_5_87041 Lactuca sativa
Manes.06G025900 Manihot esculenta
MBI14_g08081_MAGBIO Magnolia biondii
MD13G1260700 Malus domestica
MD16G1262400 Malus domestica
Medtr4g129510 Medicago truncatula
MELO3C010169.2 Cucumis melo
Migut.J01417 Erythranthe guttata
Nitab4.5_0005551g0040 Nicotiana tabacum
Nitab4.5_0005985g0060 Nicotiana tabacum
Nn2g12544 Nelumbo nucifera
Nn8g40237 Nelumbo nucifera
Oeu035673.1 Olea europaea
Os04g0498000 Oryza sativa ssp. japonica
Peaxi162Scf00525g00820 Petunia axillaris
PGR142G1620 Punica granatum
PGSC0003DMG400011172 Solanum tuberosum
Phvul.003G151200 Phaseolus vulgaris
Potri.018G099000 Populus trichocarpa
Prupe.1G097500 Prunus persica
Psat0s235g0040 Pisum sativum
PSO782G0888 Papaver somniferum
QL02p095637 Quercus lobata
RcHm_v2.0_Chr4g0404961 Rosa chinensis
Rhsim01G0012300 Rhododendron simsii
Sabra18G0085500 Salix brachista
SalBow6G6404 Salvia bowleyana
Sc08g0005620 Simmondsia chinensis
Sed0010280 Sechium edule
Sed0010370 Sechium edule
SGA_v2.0_scaffold13G06759 Striga asiatica
SGA_v2.0_scaffold66G22516 Striga asiatica
Solyc07g006320.4 Solanum lycopersicum
Sopen07g002410 Solanum pennellii
Sp6g19450 Schrenkiella parvula
TAR383G0158 Trochodendron aralioides
THA.LOC104817811 Tarenaya hassleriana
Thecc.09G160700 Theobroma cacao
Thhalv10013683m.g Eutrema salsugineum
TPR.G5337 Trifolium pratense
TWI32G1032 Tripterygium wilfordii
VMungo1215G2346 Vigna mungo
Zm00001eb078470 Zea mays
Zm00001eb425800 Zea mays

User provided reference genes

Program Settings