Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p34130 Brassica napus
A07p03810 Brassica napus
Aa31LG8G14610 Aethionema arabicum
Actinidia21670 Actinidia chinensis
Ah.01g021430 Amaranthus hybridus
AL3G39990 Arabidopsis lyrata
AL3G50100 Arabidopsis lyrata
Aqoxy7G03791 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.84WEKL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JCT5CV Arachis hypogaea
AT2G17240 Arabidopsis thaliana
AT3G24506 Arabidopsis thaliana
ATR0724G055 Amborella trichopoda
Atru.chr7.1347 Acer truncatum
BcaB03g16471 Brassica carinata
BcaB08g34716 Brassica carinata
BcaC01g02942 Brassica carinata
BcaC06g36242 Brassica carinata
BolC3t18080H Brassica oleracea
BolC7t41022H Brassica oleracea
BraA06t26346Z Brassica rapa
BraA07t28175Z Brassica rapa
C03p58060 Brassica napus
C07p06090 Brassica napus
CANSAT56G2684 Cannabis sativa
Carub.0003s2483 Capsella rubella
Carub.0003s3118 Capsella rubella
CBR_g48216 Chara braunii
Cc04_g03260 Coffea canephora
CDE04G2734 Ceratophyllum demersum
CDE07G2010 Ceratophyllum demersum
Ciclev10009718m.g Citrus clementina
CiPaw.03G232300 Carya illinoinensis
CiPaw.04G164300 Carya illinoinensis
ClCG06G008520 Citrullus lanatus
COL.COLO4_34918 Corchorus olitorius
Cpa.g.sc23.111 Carica papaya
CsaV3_1G030480 Cucumis sativus L.
CSS0003127 Camellia sinensis var. sinensis
CSS0011641 Camellia sinensis var. sinensis
CSS0027693 Camellia sinensis var. sinensis
Dinv38038 Davidia involucrata
Dinv41601 Davidia involucrata
Duzib150G0727 Durio zibethinus
Duzib187G1793 Durio zibethinus
ECA240G1876 Erigeron canadensis
Eucgr.J02982 Eucalyptus grandis
FvH4_6g31380 Fragaria vesca
Glyma.07G005500 Glycine max
Glyma.08G205900 Glycine max
Gohir.A05G022800 Gossypium hirsutum
Gohir.A05G022900 Gossypium hirsutum
Gohir.A06G062400 Gossypium hirsutum
Gohir.A08G241100 Gossypium hirsutum
Gohir.D05G024300 Gossypium hirsutum
Gohir.D05G024400 Gossypium hirsutum
Gohir.D06G060700 Gossypium hirsutum
Gohir.D08G261800 Gossypium hirsutum
Gorai.004G279900 Gossypium raimondii
Gorai.009G024400 Gossypium raimondii
Gorai.009G024500 Gossypium raimondii
Gorai.010G070700 Gossypium raimondii
GSVIVG01015393001 Vitis vinifera
GSVIVG01017090001 Vitis vinifera
HanXRQChr09g0239771 Helianthus annuus
Haze_25712 Corylus avellana
Hma1.2p1_1455F.1_g284500 Hydrangea macrophylla
HPP92_004788 Vanilla planifolia
Hund00627 Selenicereus undatus
Lalb_Chr22g0351311 Lupinus albus
Lj3g0010943 Lotus japonicus
Lsat_1_v5_gn_7_40661 Lactuca sativa
Lsat_1_v5_gn_8_95440 Lactuca sativa
Manes.03G020200 Manihot esculenta
Manes.16G116400 Manihot esculenta
Mapoly0029s0025 Marchantia polymorpha
MBI13_g01620_MAGBIO Magnolia biondii
MCO01G216 Micromonas commoda
MD02G1047200 Malus domestica
MD09G1211800 Malus domestica
Medtr4g012810 Medicago truncatula
MELO3C025336.2 Cucumis melo
Migut.I00880 Erythranthe guttata
MSTRG.11072 Avicennia marina
MSTRG.22678 Avicennia marina
Nitab4.5_0000129g0220 Nicotiana tabacum
Nitab4.5_0001983g0030 Nicotiana tabacum
Nn2g11754 Nelumbo nucifera
Oeu024066.2 Olea europaea
Oeu033499.2 Olea europaea
Oeu033500.1 Olea europaea
Oeu063954.1 Olea europaea
Os02g0614200 Oryza sativa ssp. japonica
Peaxi162Scf00329g00432 Petunia axillaris
PGR102G0312 Punica granatum
PGR102G2925 Punica granatum
PGSC0003DMG400025300 Solanum tuberosum
Phvul.010G149900 Phaseolus vulgaris
Potri.018G079700 Populus trichocarpa
Pp3c1_36270 Physcomitrium patens
Pp3c2_3480 Physcomitrium patens
PRCOL_00004718 Prasinoderma coloniale
Prupe.3G069800 Prunus persica
Prupe.7G230800 Prunus persica
Psat7g250480 Pisum sativum
PSO210G6545 Papaver somniferum
PSO210G7285 Papaver somniferum
QL02p085450 Quercus lobata
RcHm_v2.0_Chr2g0090481 Rosa chinensis
RcHm_v2.0_Chr2g0138141 Rosa chinensis
Sabra18G0067400 Salix brachista
SalBow2G1576 Salvia bowleyana
Sc12g0009330 Simmondsia chinensis
Sed0009205 Sechium edule
Sed0019935 Sechium edule
SEGI_01601 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02572 Striga asiatica
SMO347G0073 Selaginella moellendorffii
Solyc04g008710.4 Solanum lycopersicum
Sopen04g003890 Solanum pennellii
Sp3g30580 Schrenkiella parvula
TAR624G1380 Trochodendron aralioides
TAR636G2025 Trochodendron aralioides
THA.LOC104804586 Tarenaya hassleriana
THA.LOC104808760 Tarenaya hassleriana
Thecc.06G089900 Theobroma cacao
Thecc.09G110800 Theobroma cacao
Thhalv10022893m.g Eutrema salsugineum
TPR.G17682 Trifolium pratense
TWI34G0492 Tripterygium wilfordii
unitig_22.g5469 Utricularia gibba
VMungo0331G1451 Vigna mungo
Zm00001eb184630 Zea mays
Zm00001eb247070 Zea mays

User provided reference genes

Program Settings