Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14080 Brassica napus
Actinidia14484 Actinidia chinensis
Ah.02g116130 Amaranthus hybridus
AL3G39740 Arabidopsis lyrata
AL7G30690 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.54ECHP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6D2PAS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BUTP6K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CS7A8V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IPBJ4Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KEJN3W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q2BFW3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UAJL6I Arachis hypogaea
AT4G22830 Arabidopsis thaliana
ATR0810G218 Amborella trichopoda
Atru.chr9.1473 Acer truncatum
AUR62010535 Chenopodium quinoa
AUR62017360 Chenopodium quinoa
BcaC09g51070 Brassica carinata
BcaC09g51071 Brassica carinata
BcaNung01022 Brassica carinata
BolC1t01669H Brassica oleracea
BolC1t05172H Brassica oleracea
BolC3t15330H Brassica oleracea
BraA01t01356Z Brassica rapa
C01p17300 Brassica napus
CAN.G1394.24 Capsicum annuum
CAN.G630.46 Capsicum annuum
CANSAT95G0001 Cannabis sativa
CARHR229860 Cardamine hirsuta
Carub.0007s1844 Capsella rubella
Cc08_g13500 Coffea canephora
CDE04G1030 Ceratophyllum demersum
Cfa020517 Carpinus fangiana
Ciclev10024430m.g Citrus clementina
CiPaw.11G145200 Carya illinoinensis
ClCG00G000050 Citrullus lanatus
ClCG00G004660 Citrullus lanatus
ClCG00G005270 Citrullus lanatus
ClCG10G003300 Citrullus lanatus
COL.COLO4_23837 Corchorus olitorius
COL.COLO4_23838 Corchorus olitorius
Cpa.g.sc29.62 Carica papaya
Cre12.g555400 Chlamydomonas reinhardtii
CsaV3_3G003320 Cucumis sativus L.
CSS0019536 Camellia sinensis var. sinensis
DCAR_000876 Daucus carota
Dinv39056 Davidia involucrata
Dinv39057 Davidia involucrata
Duzib205G1229 Durio zibethinus
ECA233G5981 Erigeron canadensis
EL10Ac5g12653 Beta vulgaris
Eucgr.E00492 Eucalyptus grandis
FAN04G1422 Fragaria x ananassa
FAN08G3582 Fragaria x ananassa
FAN13G0774 Fragaria x ananassa
FAN18G0436 Fragaria x ananassa
FvH4_5g00940 Fragaria vesca
Glyma.01G213300 Glycine max
Glyma.11G028600 Glycine max
Gohir.A12G222500 Gossypium hirsutum
Gohir.D12G225000 Gossypium hirsutum
Gorai.008G241100 Gossypium raimondii
GSVIVG01019923001 Vitis vinifera
HanXRQChr09g0246661 Helianthus annuus
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla
HPP92_025677 Vanilla planifolia
Hund14676 Selenicereus undatus
Lalb_Chr16g0379871 Lupinus albus
Lj2A204T50 Lonicera japonica
Lj2C204G6 Lonicera japonica
Lj2g0003035 Lotus japonicus
Lsat_1_v5_gn_6_10241 Lactuca sativa
Manes.02G031801 Manihot esculenta
Mapoly0066s0013 Marchantia polymorpha
MBI12_g34479_MAGBIO Magnolia biondii
MCO03G553 Micromonas commoda
MCO11G791 Micromonas commoda
MCO14G091 Micromonas commoda
MCO14G294 Micromonas commoda
MD04G1076900 Malus domestica
MD06G1068000 Malus domestica
Medtr5g011460 Medicago truncatula
Medtr5g011478 Medicago truncatula
MELO3C013999.2 Cucumis melo
Migut.E01010 Erythranthe guttata
MSTRG.1924 Avicennia marina
Nitab4.5_0000439g0090 Nicotiana tabacum
Nitab4.5_0001265g0130 Nicotiana tabacum
Nitab4.5_0001816g0070 Nicotiana tabacum
Nitab4.5_0001884g0030 Nicotiana tabacum
Nitab4.5_0006122g0020 Nicotiana tabacum
Nn1g01189 Nelumbo nucifera
Nn4g26436 Nelumbo nucifera
Oeu064711.1 Olea europaea
Os04g0379400 Oryza sativa ssp. japonica
Peaxi162Scf00620g00019 Petunia axillaris
PGR042G2385 Punica granatum
PGSC0003DMG400003949 Solanum tuberosum
PGSC0003DMG400012515 Solanum tuberosum
Phvul.002G151800 Phaseolus vulgaris
Potri.001G114800 Populus trichocarpa
Pp3c10_11850 Physcomitrium patens
Pp3c12_9510 Physcomitrium patens
PRCOL_00002728 Prasinoderma coloniale
PRCOL_00002729 Prasinoderma coloniale
PRCOL_00005435 Prasinoderma coloniale
Prupe.5G082400 Prunus persica
Psat2g180400 Pisum sativum
PSO782G0540 Papaver somniferum
QL12p015621 Quercus lobata
RcHm_v2.0_Chr7g0200451 Rosa chinensis
Rhsim05G0172500 Rhododendron simsii
Sabra01G0087800 Salix brachista
SalBow1G3546 Salvia bowleyana
Sc01g0009080 Simmondsia chinensis
Sed0022049 Sechium edule
SEGI_29987 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35989 Striga asiatica
SMO364G0744 Selaginella moellendorffii
Solyc08g007580.4 Solanum lycopersicum
Solyc08g079680.3 Solanum lycopersicum
Sopen08g003540 Solanum pennellii
Sopen08g028040 Solanum pennellii
TAR629G1703 Trochodendron aralioides
THA.LOC104814025 Tarenaya hassleriana
Thecc.03G264400 Theobroma cacao
Thhalv10026321m.g Eutrema salsugineum
Thhalv10027121m.g Eutrema salsugineum
TPR.G19565 Trifolium pratense
TWI60G0484 Tripterygium wilfordii
vmacro00216 Vaccinium macrocarpon
VMungo1215G2211 Vigna mungo
Zm00001eb103020 Zea mays

User provided reference genes

Program Settings