Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia07866 Actinidia chinensis
Actinidia09789 Actinidia chinensis
Actinidia18832 Actinidia chinensis
Actinidia35203 Actinidia chinensis
Ah.01g002540 Amaranthus hybridus
Aqoxy4G02338 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.715EVP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8Y07GA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S46AGL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UTL0P7 Arachis hypogaea
ATR0827G126 Amborella trichopoda
Atru.chr2.3682 Acer truncatum
AUR62015005 Chenopodium quinoa
AUR62015006 Chenopodium quinoa
AUR62029117 Chenopodium quinoa
CANSAT11G2057 Cannabis sativa
Ca_06483_v3 Cicer arietinum L.
Cc03_g07410 Coffea canephora
Cfa014225 Carpinus fangiana
Cfa020199 Carpinus fangiana
Ciclev10009298m.g Citrus clementina
Ciclev10018021m.g Citrus clementina
CiPaw.03G281900 Carya illinoinensis
CiPaw.04G197000 Carya illinoinensis
CiPaw.11G203200 Carya illinoinensis
CiPaw.12G137700 Carya illinoinensis
ClCG02G009210 Citrullus lanatus
COL.COLO4_09821 Corchorus olitorius
COL.COLO4_19617 Corchorus olitorius
Cpa.g.sc12.153 Carica papaya
Cpa.g.sc136.30 Carica papaya
CsaV3_6G009640 Cucumis sativus L.
DCAR_012893 Daucus carota
DCAR_019680 Daucus carota
Dinv10326 Davidia involucrata
Dinv21298 Davidia involucrata
Dinv26604 Davidia involucrata
Duzib133G0645 Durio zibethinus
Duzib138G1177 Durio zibethinus
Duzib213G0789 Durio zibethinus
ECA240G3450 Erigeron canadensis
EL10Ac9g22679 Beta vulgaris
Eucgr.F03692 Eucalyptus grandis
Eucgr.H00876 Eucalyptus grandis
FAN02G2959 Fragaria x ananassa
FAN05G2424 Fragaria x ananassa
FAN09G2506 Fragaria x ananassa
FAN14G3262 Fragaria x ananassa
FvH4_6g40610 Fragaria vesca
Glyma.08G329000 Glycine max
Glyma.13G006500 Glycine max
Glyma.20G062100 Glycine max
Gohir.A01G091100 Gossypium hirsutum
Gohir.A07G169800 Gossypium hirsutum
Gohir.A07G192100 Gossypium hirsutum
Gohir.D01G076400 Gossypium hirsutum
Gohir.D07G171100 Gossypium hirsutum
Gohir.D07G198400 Gossypium hirsutum
Gorai.001G191400 Gossypium raimondii
Gorai.001G222200 Gossypium raimondii
Gorai.002G099600 Gossypium raimondii
Haze_09816 Corylus avellana
Haze_12628 Corylus avellana
Lalb_Chr10g0107651 Lupinus albus
Lalb_Chr15g0082031 Lupinus albus
Lj1P796T11 Lonicera japonica
Lj6g0007370 Lotus japonicus
Lj8P136T22 Lonicera japonica
Lj8P178T38 Lonicera japonica
LjContig00081g0015024 Lotus japonicus
Lsat_1_v5_gn_5_122020 Lactuca sativa
Lsat_1_v5_gn_9_103781 Lactuca sativa
Manes.03G140566 Manihot esculenta
Manes.03G140700 Manihot esculenta
Manes.12G064702 Manihot esculenta
Manes.13G061900 Manihot esculenta
Manes.15G060700 Manihot esculenta
MBI16_g22138_MAGBIO Magnolia biondii
MBI19_g14891_MAGBIO Magnolia biondii
MD09G1126800 Malus domestica
MD17G1117100 Malus domestica
Medtr3g082780 Medicago truncatula
Medtr5g098480 Medicago truncatula
MELO3C025957.2 Cucumis melo
MSTRG.12249 Avicennia marina
Nitab4.5_0000006g0660 Nicotiana tabacum
Nitab4.5_0001701g0180 Nicotiana tabacum
Nitab4.5_0004125g0020 Nicotiana tabacum
Nn1g03187 Nelumbo nucifera
Nn1g04368 Nelumbo nucifera
Nn1g07503 Nelumbo nucifera
Nn3g19233 Nelumbo nucifera
Oeu049391.1 Olea europaea
Oeu064351.1 Olea europaea
Os12g0498900 Oryza sativa ssp. japonica
Peaxi162Scf00802g00130 Petunia axillaris
PGR083G2364 Punica granatum
PGSC0003DMG400017375 Solanum tuberosum
Phvul.006G056700 Phaseolus vulgaris
Phvul.007G121090 Phaseolus vulgaris
Potri.001G367100 Populus trichocarpa
Potri.014G167700 Populus trichocarpa
Prupe.3G197400 Prunus persica
Prupe.4G242400 Prunus persica
Psat2g002880 Pisum sativum
Psat5g104280 Pisum sativum
PSO541G2883 Papaver somniferum
PSO675G3647 Papaver somniferum
QL04p068477 Quercus lobata
QL08p004345 Quercus lobata
QL11p054311 Quercus lobata
RcHm_v2.0_Chr2g0155981 Rosa chinensis
Rhsim06G0176600 Rhododendron simsii
Sabra14G0127500 Salix brachista
Sabra16G0240400 Salix brachista
Sc20g0004000 Simmondsia chinensis
Sed0012118 Sechium edule
Sed0027972 Sechium edule
Solyc07g045450.1 Solanum lycopersicum
Sopen07g023990 Solanum pennellii
TAR629G2787 Trochodendron aralioides
TAR629G2911 Trochodendron aralioides
THA.LOC104808845 Tarenaya hassleriana
THA.LOC104815364 Tarenaya hassleriana
Thecc.01G196200 Theobroma cacao
Thecc.07G014700 Theobroma cacao
TPR.G11064 Trifolium pratense
TPR.G35904 Trifolium pratense
TWI18G0644 Tripterygium wilfordii
TWI36G1699 Tripterygium wilfordii
TWI38G0138 Tripterygium wilfordii
VMungo0540G1302 Vigna mungo
VMungo0540G2501 Vigna mungo
Zm00001eb409540 Zea mays

User provided reference genes

Program Settings