Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p14540 Brassica napus
Aa31LG2G1600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3279 Anthoceros agrestis
Actinidia22190 Actinidia chinensis
Ah.12g052990 Amaranthus hybridus
AL2G10160 Arabidopsis lyrata
Aqoxy3G00691 Aquilegia oxysepala
Aqoxy5G04298 Aquilegia oxysepala
Aqoxy5G04303 Aquilegia oxysepala
Aqoxy7G02283 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HI9AVU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PR6ST2 Arachis hypogaea
AT1G64600 Arabidopsis thaliana
ATR0757G021 Amborella trichopoda
Atru.chr1.1468 Acer truncatum
Atru.chr9.1922 Acer truncatum
AUR62007027 Chenopodium quinoa
AUR62019890 Chenopodium quinoa
AUR62019891 Chenopodium quinoa
BcaB07g31478 Brassica carinata
BcaC04g22588 Brassica carinata
BolC9t54656H Brassica oleracea
BraA09t37102Z Brassica rapa
C09p17640 Brassica napus
CAN.G567.67 Capsicum annuum
CANSAT21G1860 Cannabis sativa
CARHR046320 Cardamine hirsuta
Carub.0002s0014 Capsella rubella
Ca_24013_v3 Cicer arietinum L.
CBR_g978 Chara braunii
Cc08_g16520 Coffea canephora
CDE04G1283 Ceratophyllum demersum
CDE04G2319 Ceratophyllum demersum
Cfa011951 Carpinus fangiana
Ciclev10019764m.g Citrus clementina
CiPaw.11G115200 Carya illinoinensis
ClCG01G001660 Citrullus lanatus
COL.COLO4_10763 Corchorus olitorius
Cpa.g.c33268 Carica papaya
Cpa.g.sc15.20 Carica papaya
Cpa.g.sc15.22 Carica papaya
Cre05.g237600 Chlamydomonas reinhardtii
CsaV3_5G001820 Cucumis sativus L.
CSS0040838 Camellia sinensis var. sinensis
DCAR_006499 Daucus carota
Duzib084G0923 Durio zibethinus
ECA240G1801 Erigeron canadensis
EL10Ac5g12470 Beta vulgaris
Eucgr.E01030 Eucalyptus grandis
FAN04G0204 Fragaria x ananassa
FAN08G0147 Fragaria x ananassa
FAN13G1107 Fragaria x ananassa
FAN18G1068 Fragaria x ananassa
FvH4_5g11440 Fragaria vesca
Glyma.13G191700 Glycine max
Gohir.A12G238500 Gossypium hirsutum
Gohir.D12G239600 Gossypium hirsutum
Gorai.008G256700 Gossypium raimondii
GSVIVG01019613001 Vitis vinifera
HanXRQChr13g0415001 Helianthus annuus
Haze_09129 Corylus avellana
HPP92_003273 Vanilla planifolia
Hund18289 Selenicereus undatus
Lalb_Chr13g0298981 Lupinus albus
Lj1g0001744 Lotus japonicus
Lj2A159T44 Lonicera japonica
Lj3g0011757 Lotus japonicus
Lsat_1_v5_gn_6_83620 Lactuca sativa
Manes.01G053800 Manihot esculenta
Mapoly0031s0174 Marchantia polymorpha
MBI12_g02092_MAGBIO Magnolia biondii
MCO09G139 Micromonas commoda
MD06G1113800 Malus domestica
MD14G1134800 Malus domestica
Medtr8g040530 Medicago truncatula
Medtr8g040700 Medicago truncatula
Medtr8g040720 Medicago truncatula
MELO3C005771.2 Cucumis melo
Migut.E00656 Erythranthe guttata
MSTRG.15574 Avicennia marina
MSTRG.26906 Avicennia marina
Nitab4.5_0000109g0320 Nicotiana tabacum
Nitab4.5_0002027g0040 Nicotiana tabacum
Nitab4.5_0002728g0010 Nicotiana tabacum
Nitab4.5_0006880g0020 Nicotiana tabacum
Nn1g00324 Nelumbo nucifera
Nn1g00325 Nelumbo nucifera
Nn8g41240 Nelumbo nucifera
Oeu058016.1 Olea europaea
Os07g0297300 Oryza sativa ssp. japonica
Os10g0520950 Oryza sativa ssp. japonica
Peaxi162Scf00074g00363 Petunia axillaris
PGR042G1950 Punica granatum
PGSC0003DMG400012250 Solanum tuberosum
Phvul.011G200000 Phaseolus vulgaris
Potri.001G086800 Populus trichocarpa
Pp3c9_6890 Physcomitrium patens
Prupe.5G126500 Prunus persica
Psat4g194080 Pisum sativum
PSO017G1852 Papaver somniferum
QL02p028460 Quercus lobata
QL02p028464 Quercus lobata
QL10p008953 Quercus lobata
QL10p010267 Quercus lobata
RcHm_v2.0_Chr2g0131571 Rosa chinensis
RcHm_v2.0_Chr2g0164461 Rosa chinensis
RcHm_v2.0_Chr7g0186411 Rosa chinensis
RcHm_v2.0_Chr7g0186431 Rosa chinensis
RcHm_v2.0_Chr7g0205551 Rosa chinensis
RcHm_v2.0_Chr7g0205571 Rosa chinensis
Rhsim02G0249100 Rhododendron simsii
Sabra01G0063100 Salix brachista
Sabra03G0104700 Salix brachista
Sc01g0010500 Simmondsia chinensis
Sed0023920 Sechium edule
SEGI_09534 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37696 Striga asiatica
SHI06935 Sapria himalayana
SMO115G0010 Selaginella moellendorffii
SMO116G0437 Selaginella moellendorffii
SMO119G0297 Selaginella moellendorffii
Solyc08g082880.4 Solanum lycopersicum
Sopen08g031110 Solanum pennellii
Sp2g00130 Schrenkiella parvula
TAR629G2252 Trochodendron aralioides
THA.LOC104809314 Tarenaya hassleriana
Thecc.03G224700 Theobroma cacao
Thhalv10023366m.g Eutrema salsugineum
TPR.G8535 Trifolium pratense
TWI81G0154 Tripterygium wilfordii
unitig_21.g20386 Utricularia gibba
vmacro11522 Vaccinium macrocarpon
VMungo1127G1163 Vigna mungo
Zm00001eb021260 Zea mays

User provided reference genes

Program Settings