Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p13570 Brassica napus
Aa31LG9G1090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis
Actinidia05987 Actinidia chinensis
Actinidia36121 Actinidia chinensis
AL7G49290 Arabidopsis lyrata
Aqoxy5G03753 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea
AT5G40530 Arabidopsis thaliana
ATR0824G194 Amborella trichopoda
Atru.chr2.3681 Acer truncatum
Atru.chr6.2417 Acer truncatum
AUR62043289 Chenopodium quinoa
BcaB02g07945 Brassica carinata
BcaB06g27527 Brassica carinata
BolC4t26336H Brassica oleracea
BolC4t27198H Brassica oleracea
BraA04t17017Z Brassica rapa
C04p47350 Brassica napus
CAN.G473.16 Capsicum annuum
CANSAT64G0956 Cannabis sativa
CARHR261450 Cardamine hirsuta
CARHR261460 Cardamine hirsuta
Carub.0007s3499 Capsella rubella
Ca_08532_v3 Cicer arietinum L.
Ca_25854_v3 Cicer arietinum L.
CBR_g37477 Chara braunii
Cc07_g01570 Coffea canephora
CDE09G0856 Ceratophyllum demersum
Cfa007344 Carpinus fangiana
Cfa007347 Carpinus fangiana
Cfa007349 Carpinus fangiana
Cfa024741 Carpinus fangiana
Ciclev10016139m.g Citrus clementina
CiPaw.03G045000 Carya illinoinensis
ClCG09G019300 Citrullus lanatus
COL.COLO4_29165 Corchorus olitorius
Cpa.g.c26638.3 Carica papaya
Cre07.g323450 Chlamydomonas reinhardtii
CsaV3_5G027090 Cucumis sativus L.
CSS0002651 Camellia sinensis var. sinensis
CSS0012729 Camellia sinensis var. sinensis
DCAR_021727 Daucus carota
Dinv07356 Davidia involucrata
Dinv09631 Davidia involucrata
Dinv33434 Davidia involucrata
Duzib187G1685 Durio zibethinus
ECA247G4055 Erigeron canadensis
EL10Ac6g14092 Beta vulgaris
Eucgr.I01735 Eucalyptus grandis
FAN02G1237 Fragaria x ananassa
FAN05G4937 Fragaria x ananassa
FAN09G1449 Fragaria x ananassa
FAN14G2428 Fragaria x ananassa
FvH4_6g51630 Fragaria vesca
Glyma.16G069400 Glycine max
Glyma.19G056800 Glycine max
Gohir.A05G355200 Gossypium hirsutum
Gohir.D04G058000 Gossypium hirsutum
Gorai.012G064700 Gossypium raimondii
GSVIVG01032391001 Vitis vinifera
HanXRQChr02g0043121 Helianthus annuus
Haze_14753 Corylus avellana
Hma1.2p1_1747F.1_g300470 Hydrangea macrophylla
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla
HPP92_020245 Vanilla planifolia
Lalb_Chr08g0243241 Lupinus albus
Lj1g0026070 Lotus japonicus
Lj7A600G48 Lonicera japonica
Lsat_1_v5_gn_1_11001 Lactuca sativa
Manes.15G150500 Manihot esculenta
Mapoly0055s0119 Marchantia polymorpha
MBI06_g16054_MAGBIO Magnolia biondii
MCO02G088 Micromonas commoda
MCO16G365 Micromonas commoda
MD17G1023500 Malus domestica
Medtr2g062880 Medicago truncatula
Medtr7g033530 Medicago truncatula
MELO3C021585.2 Cucumis melo
Migut.K01404 Erythranthe guttata
MSTRG.3288 Avicennia marina
Nitab4.5_0001860g0130 Nicotiana tabacum
Nitab4.5_0003318g0030 Nicotiana tabacum
Nn4g22606 Nelumbo nucifera
Os02g0593900 Oryza sativa ssp. japonica
Peaxi162Scf00129g01647 Petunia axillaris
PGR142G0612 Punica granatum
PGSC0003DMG400012605 Solanum tuberosum
Phvul.004G044500 Phaseolus vulgaris
Potri.001G344000 Populus trichocarpa
Pp3c18_8570 Physcomitrium patens
PRCOL_00001214 Prasinoderma coloniale
Prupe.3G293000 Prunus persica
Psat4g044480 Pisum sativum
PSO111G0092 Papaver somniferum
PSO407G0181 Papaver somniferum
PSO754G0028 Papaver somniferum
QL02p074142 Quercus lobata
QL12p001810 Quercus lobata
RcHm_v2.0_Chr2g0173161 Rosa chinensis
Rhsim10G0015300 Rhododendron simsii
Rhsim10G0016000 Rhododendron simsii
Sabra16G0223300 Salix brachista
SalBow7G1242 Salvia bowleyana
Sc16g0003190 Simmondsia chinensis
Sed0014974 Sechium edule
SEGI_32629 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08274 Striga asiatica
SHI16461 Sapria himalayana
SHI16462 Sapria himalayana
SMO169G0126 Selaginella moellendorffii
SMO169G0136 Selaginella moellendorffii
SMO202G0011 Selaginella moellendorffii
Solyc02g093390.4 Solanum lycopersicum
Sopen02g037980 Solanum pennellii
Sp7g01340 Schrenkiella parvula
TAR629G1250 Trochodendron aralioides
TAR629G2614 Trochodendron aralioides
THA.LOC104805364 Tarenaya hassleriana
THA.LOC104823955 Tarenaya hassleriana
Thecc.04G018700 Theobroma cacao
Thhalv10027875m.g Eutrema salsugineum
TPR.G1078 Trifolium pratense
TPR.G11046 Trifolium pratense
TPR.G35964 Trifolium pratense
TWI36G0829 Tripterygium wilfordii
TWI56G0011 Tripterygium wilfordii
unitig_46.g18705 Utricularia gibba
vmacro05871 Vaccinium macrocarpon
vmacro09039 Vaccinium macrocarpon
VMungo0464G1123 Vigna mungo
VMungo1215G2157 Vigna mungo
Zm00001eb205620 Zea mays

User provided reference genes

Program Settings