Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p37670 Brassica napus
Aa31LG3G120 Aethionema arabicum
Aa31sc79G70 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2288 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.230 Anthoceros agrestis
Actinidia13881 Actinidia chinensis
Actinidia29229 Actinidia chinensis
Ah.04g162270 Amaranthus hybridus
AL3G24160 Arabidopsis lyrata
Aqoxy3G02271 Aquilegia oxysepala
Aqoxy6G01179 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3RZV8E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5TUK4V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9R8UEA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HP7MKL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YA5U61 Arachis hypogaea
AT3G12530 Arabidopsis thaliana
ATR0579G085 Amborella trichopoda
Atru.chr12.445 Acer truncatum
AUR62012091 Chenopodium quinoa
AUR62039375 Chenopodium quinoa
BcaB04g21071 Brassica carinata
BNapus_Darmor_BZH_scaffold_149p00070 Brassica napus
BolC1t05204H Brassica oleracea
BolC3t16845H Brassica oleracea
BolC5t34206H Brassica oleracea
BraA01t04129Z Brassica rapa
BraA03t12920Z Brassica rapa
BraA05t22495Z Brassica rapa
C01p52640 Brassica napus
C03p45720 Brassica napus
C05p55400 Brassica napus
CAN.G1013.29 Capsicum annuum
CANSAT78G0186 Cannabis sativa
CARHR087030 Cardamine hirsuta
Carub.0003s1186 Capsella rubella
Ca_24072_v3 Cicer arietinum L.
CBR_g83733 Chara braunii
Cc02_g07820 Coffea canephora
CDE04G0192 Ceratophyllum demersum
Ciclev10033314m.g Citrus clementina
CiPaw.01G287700 Carya illinoinensis
ClCG10G009550 Citrullus lanatus
COL.COLO4_15048 Corchorus olitorius
Cpa.g.sc1.409 Carica papaya
Cre01.g029100 Chlamydomonas reinhardtii
CsaV3_4G009680 Cucumis sativus L.
CSS0016900 Camellia sinensis var. sinensis
CSS0040522 Camellia sinensis var. sinensis
DCAR_011703 Daucus carota
Dinv03043 Davidia involucrata
Dinv26018 Davidia involucrata
Duzib114G0236 Durio zibethinus
Duzib128G0804 Durio zibethinus
ECA236G5038 Erigeron canadensis
ECA238G0467 Erigeron canadensis
ECA240G3935 Erigeron canadensis
EL10Ac2g04744 Beta vulgaris
Eucgr.J00011 Eucalyptus grandis
FAN01G2297 Fragaria x ananassa
FAN01G2632 Fragaria x ananassa
FAN03G0424 Fragaria x ananassa
FAN06G0860 Fragaria x ananassa
FAN06G0984 Fragaria x ananassa
FAN10G2643 Fragaria x ananassa
FvH4_7g22520 Fragaria vesca
Glyma.16G058300 Glycine max
Gohir.A10G219500 Gossypium hirsutum
Gohir.D10G229000 Gossypium hirsutum
Gorai.011G261500 Gossypium raimondii
GSVIVG01024370001 Vitis vinifera
HanXRQChr14g0458031 Helianthus annuus
HanXRQChr17g0562051 Helianthus annuus
Haze_17070 Corylus avellana
Hma1.2p1_0405F.1_g145680 Hydrangea macrophylla
HPP92_027375 Vanilla planifolia
Hund16085 Selenicereus undatus
Lalb_Chr22g0360471 Lupinus albus
Lj1g0024127 Lotus japonicus
Lj8A84T88 Lonicera japonica
Lsat_1_v5_gn_1_78580 Lactuca sativa
Manes.07G116600 Manihot esculenta
Mapoly0001s0197 Marchantia polymorpha
MBI14_g35405_MAGBIO Magnolia biondii
MCO01G144 Micromonas commoda
MD01G1134500 Malus domestica
MD07G1199100 Malus domestica
Medtr7g029455 Medicago truncatula
MELO3C024840.2 Cucumis melo
Migut.M01657 Erythranthe guttata
MSTRG.287 Avicennia marina
Nitab4.5_0008565g0020 Nicotiana tabacum
Nitab4.5_0025932g0010 Nicotiana tabacum
Nn1g07214 Nelumbo nucifera
Oeu048244.1 Olea europaea
Oeu064376.1 Olea europaea
Os01g0248600 Oryza sativa ssp. japonica
Peaxi162Scf00886g00023 Petunia axillaris
PGR044G1343 Punica granatum
PGSC0003DMG402023533 Solanum tuberosum
Phvul.001G114700 Phaseolus vulgaris
Phvul.004G101800 Phaseolus vulgaris
Potri.008G056200 Populus trichocarpa
Potri.010G203600 Populus trichocarpa
Pp3c24_19790 Physcomitrium patens
PRCOL_00001833 Prasinoderma coloniale
Prupe.2G235900 Prunus persica
Psat7g263960 Pisum sativum
PSO339G6019 Papaver somniferum
PSO541G0023 Papaver somniferum
QL08p059697 Quercus lobata
RcHm_v2.0_Chr1g0367201 Rosa chinensis
Rhsim09G0166200 Rhododendron simsii
Sabra10G0157100 Salix brachista
SalBow6G6757 Salvia bowleyana
Sc11g0007930 Simmondsia chinensis
Sed0000199 Sechium edule
SEGI_05999 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01002 Striga asiatica
SMO358G0240 Selaginella moellendorffii
Solyc05g054430.4 Solanum lycopersicum
Sopen05g032920 Solanum pennellii
Sp3g10660 Schrenkiella parvula
TAR369G1142 Trochodendron aralioides
TAR623G0537 Trochodendron aralioides
THA.LOC104827330 Tarenaya hassleriana
Thecc.10G041400 Theobroma cacao
Thhalv10021517m.g Eutrema salsugineum
TPR.G2804 Trifolium pratense
TWI34G1817 Tripterygium wilfordii
unitig_27.g25062 Utricularia gibba
vmacro10230 Vaccinium macrocarpon
VMungo1383G0749 Vigna mungo
Zm00001eb331580 Zea mays

User provided reference genes

Program Settings