Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p25690 Brassica napus
A09p26960 Brassica napus
Aa31LG9G10270 Aethionema arabicum
Actinidia05173 Actinidia chinensis
Ah.01g013950 Amaranthus hybridus
AL6G47200 Arabidopsis lyrata
Aqoxy7G00679 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea
AT4G12340 Arabidopsis thaliana
ATR0115G012 Amborella trichopoda
Atru.chr6.2703 Acer truncatum
Atru.chr9.1404 Acer truncatum
AUR62025857 Chenopodium quinoa
AUR62029858 Chenopodium quinoa
BcaB01g01732 Brassica carinata
BcaB05g23754 Brassica carinata
BcaC03g16290 Brassica carinata
BcaC04g21221 Brassica carinata
BolC2t10102H Brassica oleracea
BolC9t56264H Brassica oleracea
BraA02t07561Z Brassica rapa
BraA09t38266Z Brassica rapa
C02p40850 Brassica napus
C09p34190 Brassica napus
CAN.G1528.1 Capsicum annuum
CANSAT21G1576 Cannabis sativa
CARHR253910 Cardamine hirsuta
CARHR253930 Cardamine hirsuta
Carub.0006s3148 Capsella rubella
Ca_12275_v3 Cicer arietinum L.
CBR_g50926 Chara braunii
Cc08_g13120 Coffea canephora
CDE02G0720 Ceratophyllum demersum
CDE04G3390 Ceratophyllum demersum
Cfa012808 Carpinus fangiana
Ciclev10022502m.g Citrus clementina
CiPaw.11G149200 Carya illinoinensis
CiPaw.12G105500 Carya illinoinensis
ClCG10G003070 Citrullus lanatus
COL.COLO4_23892 Corchorus olitorius
Cpa.g.sc29.103 Carica papaya
Cre03.g213425 Chlamydomonas reinhardtii
CsaV3_3G003110 Cucumis sativus L.
CSS0008349 Camellia sinensis var. sinensis
CSS0045584 Camellia sinensis var. sinensis
Dinv21579 Davidia involucrata
Dinv39089 Davidia involucrata
Duzib068G0435 Durio zibethinus
Duzib084G0572 Durio zibethinus
Duzib205G1381 Durio zibethinus
ECA233G2089 Erigeron canadensis
EL10Ac4g07900 Beta vulgaris
Eucgr.E01477 Eucalyptus grandis
FAN04G1493 Fragaria x ananassa
FAN08G1980 Fragaria x ananassa
FAN13G2021 Fragaria x ananassa
FAN18G1180 Fragaria x ananassa
FvH4_5g00490 Fragaria vesca
Glyma.05G051800 Glycine max
Gohir.A03G013800 Gossypium hirsutum
Gohir.A12G220500 Gossypium hirsutum
Gohir.D03G159700 Gossypium hirsutum
Gohir.D12G222800 Gossypium hirsutum
Gorai.003G168000 Gossypium raimondii
Gorai.008G238900 Gossypium raimondii
GSVIVG01004287001 Vitis vinifera
GSVIVG01007420001 Vitis vinifera
HanXRQChr02g0049681 Helianthus annuus
HanXRQChr13g0394681 Helianthus annuus
Haze_08597 Corylus avellana
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla
HPP92_005292 Vanilla planifolia
Hund02098 Selenicereus undatus
Lalb_Chr05g0225471 Lupinus albus
Lalb_Chr16g0389651 Lupinus albus
Lsat_1_v5_gn_6_4381 Lactuca sativa
Manes.01G074300 Manihot esculenta
Manes.02G034200 Manihot esculenta
Mapoly0001s0295 Marchantia polymorpha
MBI04_g35668_MAGBIO Magnolia biondii
MD04G1080500 Malus domestica
Medtr4g102330 Medicago truncatula
MELO3C013977.2 Cucumis melo
Migut.A00824 Erythranthe guttata
Migut.A00868 Erythranthe guttata
MSTRG.12070 Avicennia marina
Nitab4.5_0005230g0060 Nicotiana tabacum
Nitab4.5_0005535g0030 Nicotiana tabacum
Nn1g01126 Nelumbo nucifera
Nn1g01130 Nelumbo nucifera
Oeu040228.1 Olea europaea
Os05g0103500 Oryza sativa ssp. japonica
Peaxi162Scf00004g03718 Petunia axillaris
PGR031G1343 Punica granatum
PGSC0003DMG400029987 Solanum tuberosum
Phvul.003G214325 Phaseolus vulgaris
Potri.001G118700 Populus trichocarpa
Potri.003G114200 Populus trichocarpa
Pp3c15_5650 Physcomitrium patens
Pp3c8_11610 Physcomitrium patens
Prupe.4G260700 Prunus persica
Psat0s1988g0040 Pisum sativum
PSO478G0096 Papaver somniferum
PSO782G1790 Papaver somniferum
QL03p017823 Quercus lobata
QL12p014300 Quercus lobata
QL93p2009_0035 Quercus lobata
RcHm_v2.0_Chr7g0202021 Rosa chinensis
Rhsim07G0102800 Rhododendron simsii
Sabra01G0091600 Salix brachista
Sabra03G0079300 Salix brachista
SalBow6G1585 Salvia bowleyana
Sc02g0009280 Simmondsia chinensis
Sc16g0006190 Simmondsia chinensis
Sed0018910 Sechium edule
SEGI_03973 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32837 Striga asiatica
SGA_v2.0_scaffold146G36171 Striga asiatica
SHI20590 Sapria himalayana
Solyc11g065270.2 Solanum lycopersicum
Sopen11g025020 Solanum pennellii
Sp6g05250 Schrenkiella parvula
TAR374G0447 Trochodendron aralioides
TAR375G0176 Trochodendron aralioides
THA.LOC104806344 Tarenaya hassleriana
THA.LOC104813805 Tarenaya hassleriana
Thecc.03G259800 Theobroma cacao
Thhalv10029018m.g Eutrema salsugineum
TPR.G37587 Trifolium pratense
TWI15G0429 Tripterygium wilfordii
TWI81G0081 Tripterygium wilfordii
VMungo1215G0693 Vigna mungo
Zm00001eb356210 Zea mays

User provided reference genes

Program Settings