Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p14860 Brassica napus
A09p42800 Brassica napus
Aa31LG7G5940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis
Actinidia23063 Actinidia chinensis
Ah.01g019990 Amaranthus hybridus
AL1G35150 Arabidopsis lyrata
AL1G35290 Arabidopsis lyrata
AL2G37880 Arabidopsis lyrata
Aqoxy6G00155 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DQL17K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea
AT1G21930 Arabidopsis thaliana
AT3G42150 Arabidopsis thaliana
ATR0021G028 Amborella trichopoda
Atru.chr13.1407 Acer truncatum
AUR62011415 Chenopodium quinoa
AUR62016643 Chenopodium quinoa
AUR62022881 Chenopodium quinoa
BcaB03g11887 Brassica carinata
BcaB03g14247 Brassica carinata
BcaB07g32190 Brassica carinata
BcaB07g32192 Brassica carinata
BcaC05g26118 Brassica carinata
BcaC05g26120 Brassica carinata
BcaC06g34917 Brassica carinata
BcaC07g42575 Brassica carinata
BcaNung06341 Brassica carinata
BcaNung06770 Brassica carinata
BolC5t30794H Brassica oleracea
BolC5t30796H Brassica oleracea
BolC7t42713H Brassica oleracea
BraA09t39754Z Brassica rapa
C05p20980 Brassica napus
C07p21820 Brassica napus
CAN.G48.25 Capsicum annuum
CANSAT64G1100 Cannabis sativa
CARHR022310 Cardamine hirsuta
Carub.0001s2142 Capsella rubella
Ca_03724_v3 Cicer arietinum L.
Cc10_g15090 Coffea canephora
CDE01G0185 Ceratophyllum demersum
Ciclev10002958m.g Citrus clementina
CiPaw.02G169200 Carya illinoinensis
ClCG11G015600 Citrullus lanatus
Cpa.g.sc70.13 Carica papaya
CsaV3_4G028420 Cucumis sativus L.
CSS0005937 Camellia sinensis var. sinensis
CSS0009962 Camellia sinensis var. sinensis
DCAR_014096 Daucus carota
DCAR_014107 Daucus carota
Dinv27340 Davidia involucrata
Dinv40388 Davidia involucrata
Duzib041G0320 Durio zibethinus
Duzib093G2142 Durio zibethinus
ECA246G1275 Erigeron canadensis
EL10Ac9g21807 Beta vulgaris
Eucgr.F03768 Eucalyptus grandis
FAN15G3227 Fragaria x ananassa
FAN24G3109 Fragaria x ananassa
FAN27G1656 Fragaria x ananassa
FvH4_2g26520 Fragaria vesca
Glyma.13G081900 Glycine max
Glyma.14G162800 Glycine max
Gohir.A06G042500 Gossypium hirsutum
Gohir.D06G043500 Gossypium hirsutum
Gorai.010G048600 Gossypium raimondii
GSVIVG01013096001 Vitis vinifera
HanXRQChr12g0379421 Helianthus annuus
Haze_00481 Corylus avellana
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla
HPP92_010646 Vanilla planifolia
HPP92_010723 Vanilla planifolia
Hund16842 Selenicereus undatus
Lalb_Chr04g0253341 Lupinus albus
Lalb_Chr17g0343871 Lupinus albus
Lj1g0023360 Lotus japonicus
Lsat_1_v5_gn_9_83901 Lactuca sativa
Manes.18G074748 Manihot esculenta
Mapoly0038s0094 Marchantia polymorpha
MBI11_g22242_MAGBIO Magnolia biondii
MD03G1196900 Malus domestica
MD08G1168000 Malus domestica
MD15G1353400 Malus domestica
Medtr5g058700 Medicago truncatula
Medtr5g059050 Medicago truncatula
MELO3C010460.2 Cucumis melo
Migut.C01150 Erythranthe guttata
Migut.G00970 Erythranthe guttata
Migut.K01196 Erythranthe guttata
Nitab4.5_0002816g0110 Nicotiana tabacum
Nitab4.5_0010023g0030 Nicotiana tabacum
Nn1g08691 Nelumbo nucifera
Nn7g37602 Nelumbo nucifera
Oeu050902.1 Olea europaea
Os12g0481200 Oryza sativa ssp. japonica
Peaxi162Scf00241g00022 Petunia axillaris
PGR042G1795 Punica granatum
PGSC0003DMG400014827 Solanum tuberosum
Phvul.008G165500 Phaseolus vulgaris
Potri.002G086300 Populus trichocarpa
Pp3c3_450 Physcomitrium patens
Pp3c4_22520 Physcomitrium patens
Prupe.1G501700 Prunus persica
Psat2g078520 Pisum sativum
PSO170G1674 Papaver somniferum
PSO528G0081 Papaver somniferum
QL09p035324 Quercus lobata
QL09p036513 Quercus lobata
RcHm_v2.0_Chr6g0295391 Rosa chinensis
Rhsim02G0128100 Rhododendron simsii
Rhsim10G0081200 Rhododendron simsii
RhsimUnG0054200 Rhododendron simsii
Sabra02G0067700 Salix brachista
SalBow1G4500 Salvia bowleyana
Sc01g0001360 Simmondsia chinensis
Sed0016516 Sechium edule
SEGI_28823 Sequoiadendron giganteum
SGA_v2.0_scaffold52G18982 Striga asiatica
SHI08265 Sapria himalayana
SMO232G0111 Selaginella moellendorffii
Solyc03g093220.3 Solanum lycopersicum
Sopen03g024020 Solanum pennellii
Sp1g19470 Schrenkiella parvula
TAR628G1302 Trochodendron aralioides
THA.LOC104810143 Tarenaya hassleriana
Thecc.08G121200 Theobroma cacao
Thhalv10009188m.g Eutrema salsugineum
TPR.G8500 Trifolium pratense
TWI56G1238 Tripterygium wilfordii
unitig_22.g6732 Utricularia gibba
vmacro15901 Vaccinium macrocarpon
Zm00001eb102630 Zea mays
Zm00001eb318220 Zea mays

User provided reference genes

Program Settings