Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p32240 Brassica napus
Aa31LG2G8260 Aethionema arabicum
Aa31sc215G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis
Actinidia00415 Actinidia chinensis
AL5G10740 Arabidopsis lyrata
Aqoxy5G03364 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea
AT2G01640 Arabidopsis thaliana
ATR0691G195 Amborella trichopoda
ATR0827G109 Amborella trichopoda
Atru.chr5.2579 Acer truncatum
AUR62010278 Chenopodium quinoa
AUR62039111 Chenopodium quinoa
AUR62044681 Chenopodium quinoa
BcaB07g30381 Brassica carinata
BcaC03g17064 Brassica carinata
BolC2t11063H Brassica oleracea
BraA02t08240Z Brassica rapa
C02p49840 Brassica napus
CAN.G517.16 Capsicum annuum
CANSAT11G0172 Cannabis sativa
CANSAT25G3357 Cannabis sativa
CARHR144210 Cardamine hirsuta
Carub.0005s0059 Capsella rubella
Ca_06388_v3 Cicer arietinum L.
Ca_18661_v3 Cicer arietinum L.
Ca_30413_v3 Cicer arietinum L.
Cc02_g19170 Coffea canephora
CDE01G0172 Ceratophyllum demersum
Ciclev10030223m.g Citrus clementina
CiPaw.06G170100 Carya illinoinensis
CiPaw.07G088900 Carya illinoinensis
ClCG01G025500 Citrullus lanatus
ClCG04G002790 Citrullus lanatus
COL.COLO4_32605 Corchorus olitorius
Cpa.g.sc246.10 Carica papaya
CsaV3_4G029930 Cucumis sativus L.
CSS0006486 Camellia sinensis var. sinensis
DCAR_029081 Daucus carota
Dinv15756 Davidia involucrata
Duzib132G0170 Durio zibethinus
ECA234G2840 Erigeron canadensis
EL10Ac9g22299 Beta vulgaris
Eucgr.G01363 Eucalyptus grandis
Eucgr.H03226 Eucalyptus grandis
FAN04G0262 Fragaria x ananassa
FAN08G1793 Fragaria x ananassa
FAN13G0291 Fragaria x ananassa
FAN18G4374 Fragaria x ananassa
FvH4_5g29540 Fragaria vesca
Glyma.12G113700 Glycine max
Glyma.20G127400 Glycine max
Gohir.A03G186800 Gossypium hirsutum
Gohir.D02G207600 Gossypium hirsutum
Gorai.005G235500 Gossypium raimondii
GSVIVG01003168001 Vitis vinifera
HanXRQChr16g0514881 Helianthus annuus
Haze_10160 Corylus avellana
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla
HPP92_026144 Vanilla planifolia
Hund00127 Selenicereus undatus
Hund00128 Selenicereus undatus
Lalb_Chr21g0308391 Lupinus albus
Lj3g0023632 Lotus japonicus
Lj5g0000760 Lotus japonicus
Lj9A321T79 Lonicera japonica
Lsat_1_v5_gn_5_114720 Lactuca sativa
Manes.10G074300 Manihot esculenta
Mapoly0052s0016 Marchantia polymorpha
MD05G1087800 Malus domestica
MD08G1229200 Malus domestica
MD15G1423200 Malus domestica
Medtr1g107495 Medicago truncatula
MELO3C002833.2 Cucumis melo
MELO3C003274.2 Cucumis melo
MELO3C033554.2 Cucumis melo
Migut.N01172 Erythranthe guttata
MSTRG.27741 Avicennia marina
Nitab4.5_0000209g0220 Nicotiana tabacum
Nitab4.5_0001647g0080 Nicotiana tabacum
Nn1g04717 Nelumbo nucifera
Nn2g12688 Nelumbo nucifera
Os12g0244500 Oryza sativa ssp. japonica
Peaxi162Scf00880g00322 Petunia axillaris
PGR042G1992 Punica granatum
PGSC0003DMG400005012 Solanum tuberosum
Phvul.007G038800 Phaseolus vulgaris
Potri.009G097000 Populus trichocarpa
Pp3c21_2370 Physcomitrium patens
Prupe.1G568500 Prunus persica
Psat6g219720 Pisum sativum
PSO170G4182 Papaver somniferum
PSO210G1068 Papaver somniferum
QL11p033993 Quercus lobata
QL11p034007 Quercus lobata
QL11p034047 Quercus lobata
RcHm_v2.0_Chr7g0222441 Rosa chinensis
Rhsim11G0160600 Rhododendron simsii
Sabra09G0074500 Salix brachista
Sabra09G0074600 Salix brachista
SalBow3G3341 Salvia bowleyana
Sc08g0001470 Simmondsia chinensis
Sed0003004 Sechium edule
SEGI_38856 Sequoiadendron giganteum
SGA_v2.0_scaffold393G50707 Striga asiatica
SGA_v2.0_scaffold42G16001 Striga asiatica
SMO364G0308 Selaginella moellendorffii
SMO364G0554 Selaginella moellendorffii
Solyc12g056030.2 Solanum lycopersicum
Sopen12g028550 Solanum pennellii
Sp2g13090 Schrenkiella parvula
TAR381G1673 Trochodendron aralioides
TAR625G0497 Trochodendron aralioides
TAR625G1254 Trochodendron aralioides
THA.LOC104823732 Tarenaya hassleriana
Thecc.02G106700 Theobroma cacao
Thhalv10005665m.g Eutrema salsugineum
TPR.G13876 Trifolium pratense
TWI31G0230 Tripterygium wilfordii
unitig_94.g28296 Utricularia gibba
unitig_94.g28309 Utricularia gibba
vmacro14445 Vaccinium macrocarpon
Zm00001eb006370 Zea mays
Zm00001eb057830 Zea mays
Zm00001eb091410 Zea mays
Zm00001eb133530 Zea mays
Zm00001eb207600 Zea mays
Zm00001eb259520 Zea mays
Zm00001eb324360 Zea mays
Zm00001eb324920 Zea mays
Zm00001eb350190 Zea mays
Zm00001eb380340 Zea mays

User provided reference genes

Program Settings