Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p36960 Brassica napus
A09p05710 Brassica napus
Aa31LG11G9920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2503 Anthoceros agrestis
Actinidia17738 Actinidia chinensis
Ah.06g190730 Amaranthus hybridus
AL6G38590 Arabidopsis lyrata
Aqoxy2G02470 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CWLZ7L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TKMT5T Arachis hypogaea
AT5G26610 Arabidopsis thaliana
ATR0796G273 Amborella trichopoda
Atru.chr12.1539 Acer truncatum
AUR62000478 Chenopodium quinoa
AUR62006820 Chenopodium quinoa
BcaB04g19716 Brassica carinata
BcaC04g23633 Brassica carinata
BcaNung03680 Brassica carinata
BcaNung03908 Brassica carinata
BcaNung03909 Brassica carinata
BolC7t44686H Brassica oleracea
BolC9t53550H Brassica oleracea
BraA06t26622Z Brassica rapa
BraA09t36211Z Brassica rapa
C07p41530 Brassica napus
C09p06300 Brassica napus
CAN.G1248.16 Capsicum annuum
CANSAT54G1651 Cannabis sativa
CARHR186850 Cardamine hirsuta
Carub.0006s2438 Capsella rubella
Ca_09273_v3 Cicer arietinum L.
CBR_g48434 Chara braunii
Cc02_g35870 Coffea canephora
CDE01G0499 Ceratophyllum demersum
CDE12G0859 Ceratophyllum demersum
CDE12G0861 Ceratophyllum demersum
Cfa006771 Carpinus fangiana
Ciclev10012662m.g Citrus clementina
CiPaw.07G036400 Carya illinoinensis
ClCG03G017880 Citrullus lanatus
COL.COLO4_05485 Corchorus olitorius
Cpa.g.sc48.51 Carica papaya
Cre03.g201250 Chlamydomonas reinhardtii
CsaV3_1G038040 Cucumis sativus L.
CSS0017545 Camellia sinensis var. sinensis
CSS0045001 Camellia sinensis var. sinensis
DCAR_006590 Daucus carota
Dinv24515 Davidia involucrata
Dinv30950 Davidia involucrata
ECA240G4745 Erigeron canadensis
EL10Ac4g09561 Beta vulgaris
Eucgr.B01823 Eucalyptus grandis
FAN02G3127 Fragaria x ananassa
FAN05G0435 Fragaria x ananassa
FAN09G2233 Fragaria x ananassa
FAN14G1262 Fragaria x ananassa
FvH4_6g08510 Fragaria vesca
Glyma.03G228100 Glycine max
Glyma.19G225400 Glycine max
Gohir.A13G177700 Gossypium hirsutum
Gohir.D13G184300 Gossypium hirsutum
Gorai.013G210000 Gossypium raimondii
GSVIVG01031331001 Vitis vinifera
HanXRQChr09g0247941 Helianthus annuus
Haze_03986 Corylus avellana
Hma1.2p1_0052F.1_g030390 Hydrangea macrophylla
Hma1.2p1_0052F.1_g030400 Hydrangea macrophylla
HPP92_006322 Vanilla planifolia
HPP92_027884 Vanilla planifolia
Hund07271 Selenicereus undatus
Hund21832 Selenicereus undatus
Lalb_Chr18g0046231 Lupinus albus
Lj1g0011738 Lotus japonicus
Lsat_1_v5_gn_7_64900 Lactuca sativa
Manes.08G107500 Manihot esculenta
Manes.09G181300 Manihot esculenta
Mapoly0026s0010 Marchantia polymorpha
MBI06_g28828_MAGBIO Magnolia biondii
MBI09_g02136_MAGBIO Magnolia biondii
MBI12_g27791_MAGBIO Magnolia biondii
MBI12_g47801_MAGBIO Magnolia biondii
MBI18_g10370_MAGBIO Magnolia biondii
MD12G1199800 Malus domestica
Medtr7g111520 Medicago truncatula
MELO3C015241.2 Cucumis melo
MELO3C021663.2 Cucumis melo
Migut.N00974 Erythranthe guttata
Migut.O00760 Erythranthe guttata
MSTRG.27910 Avicennia marina
Nitab4.5_0002516g0020 Nicotiana tabacum
Nitab4.5_0005662g0030 Nicotiana tabacum
Nn3g21953 Nelumbo nucifera
Nn4g25335 Nelumbo nucifera
Oeu023421.1 Olea europaea
Os04g0114801 Oryza sativa ssp. japonica
Os04g0115400 Oryza sativa ssp. japonica
Os05g0229475 Oryza sativa ssp. japonica
Peaxi162Scf00194g00018 Petunia axillaris
PGR083G0870 Punica granatum
PGR083G1613 Punica granatum
PGSC0003DMG400018243 Solanum tuberosum
Phvul.001G222000 Phaseolus vulgaris
Potri.005G002700 Populus trichocarpa
Potri.013G002100 Populus trichocarpa
Pp3c20_6860 Physcomitrium patens
Prupe.6G304400 Prunus persica
Psat3g015120 Pisum sativum
PSO210G7107 Papaver somniferum
PSO761G0619 Papaver somniferum
QL03p011008 Quercus lobata
RcHm_v2.0_Chr3g0458551 Rosa chinensis
Rhsim11G0104700 Rhododendron simsii
Rhsim11G0105000 Rhododendron simsii
Sabra05G0000100 Salix brachista
Sabra05G0014200 Salix brachista
Sabra13G0001500 Salix brachista
Sc09g0002410 Simmondsia chinensis
Sed0027683 Sechium edule
SEGI_10560 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09707 Striga asiatica
SMO196G0190 Selaginella moellendorffii
Solyc01g101250.3 Solanum lycopersicum
Sopen01g044700 Solanum pennellii
Sp2g21260 Schrenkiella parvula
TAR636G1621 Trochodendron aralioides
THA.LOC104821749 Tarenaya hassleriana
Thecc.05G329600 Theobroma cacao
Thhalv10004695m.g Eutrema salsugineum
TPR.G1630 Trifolium pratense
TWI12G0016 Tripterygium wilfordii
unitig_26.g9561 Utricularia gibba
vmacro01667 Vaccinium macrocarpon
VMungo1383G1915 Vigna mungo
Zm00001eb089260 Zea mays

User provided reference genes

Program Settings