Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p21320 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis
Actinidia21988 Actinidia chinensis
Actinidia40470 Actinidia chinensis
Ah.09g226210 Amaranthus hybridus
AL4G19680 Arabidopsis lyrata
Aqoxy5G01398 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea
AT2G26680 Arabidopsis thaliana
ATR0225G021 Amborella trichopoda
Atru.chr7.1162 Acer truncatum
AUR62011128 Chenopodium quinoa
AUR62013360 Chenopodium quinoa
BcaB06g28186 Brassica carinata
BcaC02g08209 Brassica carinata
BolC4t27250H Brassica oleracea
BraA04t17698Z Brassica rapa
C04p57230 Brassica napus
CAN.G1591.11 Capsicum annuum
CAN.G204.2 Capsicum annuum
CANSAT11G1244 Cannabis sativa
CARHR118580 Cardamine hirsuta
CARHR118590 Cardamine hirsuta
Carub.0004s0696 Capsella rubella
Ca_13270_v3 Cicer arietinum L.
Ca_14592_v3 Cicer arietinum L.
Ca_21683_v3 Cicer arietinum L.
Cc06_g08520 Coffea canephora
CDE04G1080 Ceratophyllum demersum
Cfa003372 Carpinus fangiana
Ciclev10008932m.g Citrus clementina
CiPaw.03G244100 Carya illinoinensis
CiPaw.04G171000 Carya illinoinensis
ClCG11G003030 Citrullus lanatus
Cpa.g.sc75.29 Carica papaya
Cre09.g386747 Chlamydomonas reinhardtii
Cre09.g386756 Chlamydomonas reinhardtii
Cre09.g395000 Chlamydomonas reinhardtii
CsaV3_2G002850 Cucumis sativus L.
CSS0017066 Camellia sinensis var. sinensis
CSS0027185 Camellia sinensis var. sinensis
DCAR_009187 Daucus carota
DCAR_017816 Daucus carota
Dinv36528 Davidia involucrata
Duzib168G1077 Durio zibethinus
EL10Ac8g18654 Beta vulgaris
Eucgr.B02426 Eucalyptus grandis
Eucgr.B02447 Eucalyptus grandis
Eucgr.C01173 Eucalyptus grandis
Eucgr.C03225 Eucalyptus grandis
Eucgr.E01840 Eucalyptus grandis
Eucgr.G00617 Eucalyptus grandis
FAN19G0135 Fragaria x ananassa
FAN23G1198 Fragaria x ananassa
FAN26G2420 Fragaria x ananassa
FAN28G2006 Fragaria x ananassa
FvH4_1g03280 Fragaria vesca
Glyma.13G167400 Glycine max
Glyma.17G115000 Glycine max
Gohir.A06G056101 Gossypium hirsutum
Gohir.D06G054601 Gossypium hirsutum
Gorai.010G064100 Gossypium raimondii
GSVIVG01015529001 Vitis vinifera
HanXRQChr06g0180341 Helianthus annuus
HanXRQChr17g0537711 Helianthus annuus
HanXRQChr17g0537731 Helianthus annuus
Haze_25579 Corylus avellana
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla
HPP92_017605 Vanilla planifolia
Hund09127 Selenicereus undatus
Lalb_Chr12g0197941 Lupinus albus
Lalb_Chr13g0301881 Lupinus albus
Lj2A929T15 Lonicera japonica
Lj2C942T8 Lonicera japonica
Lj4g0013357 Lotus japonicus
Lsat_1_v5_gn_8_58680 Lactuca sativa
Manes.06G058801 Manihot esculenta
MBI16_g24711_MAGBIO Magnolia biondii
MCO17G004 Micromonas commoda
MD02G1032800 Malus domestica
Medtr4g114160 Medicago truncatula
MELO3C004508.2 Cucumis melo
Migut.B01717 Erythranthe guttata
MSTRG.19597 Avicennia marina
Nitab4.5_0002658g0050 Nicotiana tabacum
Nitab4.5_0014105g0010 Nicotiana tabacum
Nn2g12789 Nelumbo nucifera
Oeu007499.1 Olea europaea
Os03g0566600 Oryza sativa ssp. japonica
Peaxi162Scf00157g01524 Petunia axillaris
PGR142G1018 Punica granatum
PGSC0003DMG400002918 Solanum tuberosum
Phvul.003G164300 Phaseolus vulgaris
Potri.002G119800 Populus trichocarpa
Potri.014G017900 Populus trichocarpa
Pp3c12_8840 Physcomitrium patens
Prupe.7G242700 Prunus persica
Psat4g040200 Pisum sativum
PSO675G5818 Papaver somniferum
PSO782G3266 Papaver somniferum
QL10p023454 Quercus lobata
RcHm_v2.0_Chr2g0088431 Rosa chinensis
Rhsim01G0070600 Rhododendron simsii
Rhsim01G0071200 Rhododendron simsii
Sabra02G0094300 Salix brachista
Sabra14G0011800 Salix brachista
SalBow3G4290 Salvia bowleyana
Sc08g0006620 Simmondsia chinensis
Sed0008025 Sechium edule
SGA_v2.0_scaffold299G47720 Striga asiatica
SHI03392 Sapria himalayana
SMO147G0115 Selaginella moellendorffii
Solyc12g009430.2 Solanum lycopersicum
Sopen12g004430 Solanum pennellii
Sp4g09150 Schrenkiella parvula
TAR381G0761 Trochodendron aralioides
TAR625G0074 Trochodendron aralioides
THA.LOC104815280 Tarenaya hassleriana
Thecc.09G126400 Theobroma cacao
Thhalv10002044m.g Eutrema salsugineum
Thhalv10023596m.g Eutrema salsugineum
TPR.G10697 Trifolium pratense
TWI34G0282 Tripterygium wilfordii
unitig_748.g8100 Utricularia gibba
vmacro20556 Vaccinium macrocarpon
VMungo0464G1687 Vigna mungo
VMungo0647G0470 Vigna mungo
VMungo1215G3451 Vigna mungo
Zm00001eb043030 Zea mays
Zm00001eb219900 Zea mays

User provided reference genes

Program Settings