Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p30520 Brassica napus
A09p02550 Brassica napus
Aa31LG5G2740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis
Actinidia30496 Actinidia chinensis
AL6G49690 Arabidopsis lyrata
Aqoxy7G03432 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea
AT4G03240 Arabidopsis thaliana
ATR1132G123 Amborella trichopoda
Atru.chr6.3097 Acer truncatum
AUR62007448 Chenopodium quinoa
AUR62040308 Chenopodium quinoa
BcaB01g01964 Brassica carinata
BcaB01g02514 Brassica carinata
BcaC01g06695 Brassica carinata
BcaC04g23988 Brassica carinata
BolC3t16000H Brassica oleracea
BraA03t12233Z Brassica rapa
BraA09t35901Z Brassica rapa
C03p36930 Brassica napus
CAN.G640.15 Capsicum annuum
CANSAT21G1768 Cannabis sativa
CARHR152490 Cardamine hirsuta
CARHR251690 Cardamine hirsuta
Carub.0006s3382 Capsella rubella
Ca_03448_v3 Cicer arietinum L.
CBR_g3856 Chara braunii
Cc05_g05680 Coffea canephora
CDE02G1488 Ceratophyllum demersum
Cfa024975 Carpinus fangiana
Ciclev10016814m.g Citrus clementina
CiPaw.03G166600 Carya illinoinensis
CiPaw.04G121300 Carya illinoinensis
ClCG02G011330 Citrullus lanatus
COL.COLO4_13056 Corchorus olitorius
Cre12.g538350 Chlamydomonas reinhardtii
CsaV3_6G012280 Cucumis sativus L.
CSS0036944 Camellia sinensis var. sinensis
CSS0044572 Camellia sinensis var. sinensis
DCAR_009705 Daucus carota
DCAR_021205 Daucus carota
Dinv02570 Davidia involucrata
Dinv13856 Davidia involucrata
Duzib248G0701 Durio zibethinus
ECA246G1767 Erigeron canadensis
EL10Ac2g02755 Beta vulgaris
EL10Ac5g12980 Beta vulgaris
Eucgr.K00886 Eucalyptus grandis
FAN02G1820 Fragaria x ananassa
FAN05G1257 Fragaria x ananassa
FAN09G3032 Fragaria x ananassa
FAN14G4258 Fragaria x ananassa
FvH4_6g44280 Fragaria vesca
Glyma.03G007300 Glycine max
Glyma.19G118800 Glycine max
Gohir.A03G161900 Gossypium hirsutum
Gohir.D02G185101 Gossypium hirsutum
Gorai.005G207400 Gossypium raimondii
GSVIVG01000441001 Vitis vinifera
GSVIVG01027852001 Vitis vinifera
HanXRQChr04g0112441 Helianthus annuus
HanXRQChr17g0543121 Helianthus annuus
Haze_01489 Corylus avellana
Haze_13026 Corylus avellana
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla
Hma1.2p1_3430F.1_g335990 Hydrangea macrophylla
HPP92_008010 Vanilla planifolia
Hund06769 Selenicereus undatus
Lalb_Chr22g0358491 Lupinus albus
Lj1g0005576 Lotus japonicus
Lsat_1_v5_gn_3_41801 Lactuca sativa
Manes.18G113901 Manihot esculenta
Mapoly0009s0241 Marchantia polymorpha
MCO13G341 Micromonas commoda
MD09G1099400 Malus domestica
MD17G1087700 Malus domestica
Medtr6g071520 Medicago truncatula
Medtr6g071700 Medicago truncatula
Medtr7g087030 Medicago truncatula
MELO3C013522.2 Cucumis melo
Migut.F00120 Erythranthe guttata
MSTRG.14168 Avicennia marina
Nitab4.5_0004360g0020 Nicotiana tabacum
Nitab4.5_0006653g0030 Nicotiana tabacum
Nn2g10488 Nelumbo nucifera
Oeu005644.2 Olea europaea
Oeu025479.1 Olea europaea
Oeu037169.1 Olea europaea
Os01g0783600 Oryza sativa ssp. japonica
Peaxi162Scf00007g01734 Petunia axillaris
PGR142G2655 Punica granatum
PGSC0003DMG400026152 Solanum tuberosum
Phvul.001G107000 Phaseolus vulgaris
Potri.013G150400 Populus trichocarpa
Pp3c9_21390 Physcomitrium patens
PRCOL_00006727 Prasinoderma coloniale
Prupe.3G227000 Prunus persica
Psat3g085640 Pisum sativum
PSO170G6190 Papaver somniferum
PSO210G2402 Papaver somniferum
QL08p035991 Quercus lobata
RcHm_v2.0_Chr2g0161141 Rosa chinensis
Rhsim04G0058700 Rhododendron simsii
RhsimUnG0197800 Rhododendron simsii
Sabra13G0120900 Salix brachista
SalBow1G3361 Salvia bowleyana
SalBow1G8148 Salvia bowleyana
SalBow6G6406 Salvia bowleyana
Sc12g0002590 Simmondsia chinensis
Sed0001645 Sechium edule
Sed0008711 Sechium edule
SEGI_37806 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37608 Striga asiatica
SGA_v2.0_scaffold49G18319 Striga asiatica
SHI10263 Sapria himalayana
SMO140G0069 Selaginella moellendorffii
Solyc07g053150.3 Solanum lycopersicum
Sopen07g026700 Solanum pennellii
Sp6g03280 Schrenkiella parvula
TAR626G0084 Trochodendron aralioides
THA.LOC104806805 Tarenaya hassleriana
Thecc.02G167000 Theobroma cacao
Thhalv10028999m.g Eutrema salsugineum
TPR.G7847 Trifolium pratense
TWI18G0421 Tripterygium wilfordii
TWI36G1190 Tripterygium wilfordii
unitig_749.g13948 Utricularia gibba
vmacro15799 Vaccinium macrocarpon
VMungo0647G1299 Vigna mungo
VMungo1383G0784 Vigna mungo
Zm00001eb034710 Zea mays
Zm00001eb151360 Zea mays

User provided reference genes

Program Settings