Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00790 Brassica napus
A08p23250 Brassica napus
Actinidia06567 Actinidia chinensis
Actinidia20016 Actinidia chinensis
Actinidia28235 Actinidia chinensis
Ah.02g122540 Amaranthus hybridus
Ah.03g143620 Amaranthus hybridus
AL7G12150 Arabidopsis lyrata
Aqoxy6G00789 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I4SKYX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LSP3Z9 Arachis hypogaea
AT4G39900 Arabidopsis thaliana
Atru.chr4.60 Acer truncatum
AUR62002005 Chenopodium quinoa
AUR62003797 Chenopodium quinoa
BcaB02g08758 Brassica carinata
BcaB03g12290 Brassica carinata
BcaC01g00328 Brassica carinata
BcaNung00793 Brassica carinata
BcaNung00911 Brassica carinata
BcaNung06391 Brassica carinata
BolC3t20101H Brassica oleracea
BraA01t00082Z Brassica rapa
BraA08t34281Z Brassica rapa
C01p00910 Brassica napus
C03p78490 Brassica napus
CAN.G18.15 Capsicum annuum
CAN.G18.16 Capsicum annuum
CANSAT01G0800 Cannabis sativa
CARHR113520 Cardamine hirsuta
CARHR246800 Cardamine hirsuta
Carub.0007s0184 Capsella rubella
Ca_16522_v3 Cicer arietinum L.
Cc07_g15160 Coffea canephora
Cfa002656 Carpinus fangiana
Ciclev10026269m.g Citrus clementina
CiPaw.03G142200 Carya illinoinensis
CiPaw.04G099800 Carya illinoinensis
ClCG10G008980 Citrullus lanatus
Cpa.g.sc230.1 Carica papaya
CsaV3_4G008880 Cucumis sativus L.
DCAR_010089 Daucus carota
DCAR_014222 Daucus carota
Dinv13192 Davidia involucrata
Dinv21904 Davidia involucrata
Duzib147G1550 Durio zibethinus
Duzib187G0152 Durio zibethinus
Duzib264G1072 Durio zibethinus
ECA232G0795 Erigeron canadensis
ECA232G1467 Erigeron canadensis
EL10Ac6g15110 Beta vulgaris
Eucgr.H04782 Eucalyptus grandis
FAN19G2427 Fragaria x ananassa
FAN23G0105 Fragaria x ananassa
FvH4_1g20820 Fragaria vesca
Glyma.11G240400 Glycine max
Glyma.18G016900 Glycine max
Gohir.A10G085300 Gossypium hirsutum
Gohir.A11G201100 Gossypium hirsutum
Gohir.A12G083366 Gossypium hirsutum
Gohir.D10G103600 Gossypium hirsutum
Gohir.D11G221400 Gossypium hirsutum
Gohir.D12G083200 Gossypium hirsutum
Gorai.007G238400 Gossypium raimondii
Gorai.008G090000 Gossypium raimondii
Gorai.011G113200 Gossypium raimondii
GSVIVG01002272001 Vitis vinifera
HanXRQChr05g0145211 Helianthus annuus
HanXRQChr09g0254761 Helianthus annuus
HanXRQChr09g0255041 Helianthus annuus
HanXRQChr10g0305381 Helianthus annuus
Haze_24926 Corylus avellana
Hma1.2p1_1428F.1_g282935 Hydrangea macrophylla
Hund16289 Selenicereus undatus
Lalb_Chr23g0277481 Lupinus albus
Lj2C549G6 Lonicera japonica
Lj6g0021205 Lotus japonicus
Lsat_1_v5_gn_0_33121 Lactuca sativa
Lsat_1_v5_gn_4_141220 Lactuca sativa
Manes.12G134500 Manihot esculenta
Manes.13G075600 Manihot esculenta
MBI02_g31269_MAGBIO Magnolia biondii
MBI09_g06374_MAGBIO Magnolia biondii
MD01G1030700 Malus domestica
MD15G1323600 Malus domestica
Medtr3g087150 Medicago truncatula
MELO3C018959.2 Cucumis melo
Migut.L00124 Erythranthe guttata
MSTRG.15713 Avicennia marina
MSTRG.23345 Avicennia marina
MSTRG.2569 Avicennia marina
MSTRG.3778 Avicennia marina
Nitab4.5_0000083g0250 Nicotiana tabacum
Nitab4.5_0000897g0060 Nicotiana tabacum
Nitab4.5_0004651g0010 Nicotiana tabacum
Nn5g30114 Nelumbo nucifera
Oeu001791.1 Olea europaea
Oeu026089.1 Olea europaea
Oeu051807.1 Olea europaea
Oeu056609.1 Olea europaea
Peaxi162Scf00212g00413 Petunia axillaris
Peaxi162Scf00611g00015 Petunia axillaris
PGR102G1433 Punica granatum
PGSC0003DMG400001876 Solanum tuberosum
Phvul.001G252300 Phaseolus vulgaris
Potri.007G093200 Populus trichocarpa
Prupe.6G187400 Prunus persica
Psat5g090240 Pisum sativum
PSO541G0090 Papaver somniferum
PSO781G0022 Papaver somniferum
QL06p049491 Quercus lobata
RcHm_v2.0_Chr2g0113441 Rosa chinensis
Rhsim08G0010800 Rhododendron simsii
Sabra07G0077200 Salix brachista
SalBow5G0456 Salvia bowleyana
SalBow5G2541 Salvia bowleyana
Sc03g0002070 Simmondsia chinensis
Sed0017830 Sechium edule
SGA_v2.0_scaffold47G17788 Striga asiatica
Solyc04g055250.4 Solanum lycopersicum
Sopen04g025100 Solanum pennellii
Sp7g35990 Schrenkiella parvula
TAR628G0897 Trochodendron aralioides
THA.LOC104807691 Tarenaya hassleriana
Thecc.01G101100 Theobroma cacao
Thhalv10026058m.g Eutrema salsugineum
TPR.G17850 Trifolium pratense
TWI74G1407 Tripterygium wilfordii
unitig_32.g10698 Utricularia gibba
unitig_32.g11811 Utricularia gibba
unitig_88.g27721 Utricularia gibba
vmacro12958 Vaccinium macrocarpon
vmacro18598 Vaccinium macrocarpon
VMungo1383G2465 Vigna mungo

User provided reference genes

Program Settings