Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p20460 Brassica napus
A06p27110 Brassica napus
A10p15470 Brassica napus
Aa31LG4G15980 Aethionema arabicum
Ah.15g099770 Amaranthus hybridus
AL5G26310 Arabidopsis lyrata
Aqoxy2G00950 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8DRC0W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AMG8UC Arachis hypogaea
AT3G47070 Arabidopsis thaliana
ATR0618G101 Amborella trichopoda
AUR62001678 Chenopodium quinoa
AUR62020102 Chenopodium quinoa
BcaB01g00949 Brassica carinata
BcaB02g10703 Brassica carinata
BcaC01g01857 Brassica carinata
BcaC01g01858 Brassica carinata
BcaC01g02249 Brassica carinata
BcaC04g19852 Brassica carinata
BcaC04g19853 Brassica carinata
BNapus_Darmor_BZH_scaffold_82p00020 Brassica napus
BolC3t19011H Brassica oleracea
BolC3t19415H Brassica oleracea
BolC9t57959H Brassica oleracea
BraA06t25121Z Brassica rapa
BraA06t25647Z Brassica rapa
BraA10t43688Z Brassica rapa
C03p71300 Brassica napus
C09p51020 Brassica napus
CAN.G394.109 Capsicum annuum
CAN.G780.4 Capsicum annuum
CANSAT54G2446 Cannabis sativa
CARHR272810 Cardamine hirsuta
Carub.0005s1331 Capsella rubella
Carub.0008s1950 Capsella rubella
Ca_05589_v3 Cicer arietinum L.
Ca_14913_v3 Cicer arietinum L.
CDE02G0229 Ceratophyllum demersum
Cfa011662 Carpinus fangiana
Ciclev10029657m.g Citrus clementina
CiPaw.13G080400 Carya illinoinensis
CiPaw.14G060800 Carya illinoinensis
ClCG02G019670 Citrullus lanatus
COL.COLO4_19113 Corchorus olitorius
Cpa.g.sc112.49 Carica papaya
CsaV3_6G016350 Cucumis sativus L.
DCAR_018965 Daucus carota
Dinv14462 Davidia involucrata
Dinv28620 Davidia involucrata
Duzib150G1392 Durio zibethinus
Duzib168G1366 Durio zibethinus
Duzib170G0110 Durio zibethinus
ECA236G3788 Erigeron canadensis
EL10Ac7g16131 Beta vulgaris
FAN11G0366 Fragaria x ananassa
FAN16G2097 Fragaria x ananassa
FAN21G0983 Fragaria x ananassa
FAN25G1329 Fragaria x ananassa
FvH4_3g38260 Fragaria vesca
Glyma.11G176000 Glycine max
Glyma.18G065900 Glycine max
Gohir.A03G049700 Gossypium hirsutum
Gohir.A05G089600 Gossypium hirsutum
Gohir.D03G117600 Gossypium hirsutum
Gohir.D05G090500 Gossypium hirsutum
Gorai.003G124000 Gossypium raimondii
Gorai.009G093000 Gossypium raimondii
GSVIVG01024785001 Vitis vinifera
Haze_24267 Corylus avellana
Hma1.2p1_1010F.1_g247360 Hydrangea macrophylla
HPP92_012634 Vanilla planifolia
Lalb_Chr04g0252281 Lupinus albus
Lalb_Chr04g0252321 Lupinus albus
Lalb_Chr10g0103291 Lupinus albus
Lj6g0027141 Lotus japonicus
LjContig00155g0018843 Lotus japonicus
Lsat_1_v5_gn_8_71220 Lactuca sativa
Manes.01G163700 Manihot esculenta
Manes.02G121312 Manihot esculenta
MBI06_g39483_MAGBIO Magnolia biondii
MBI06_g42850_MAGBIO Magnolia biondii
MBI14_g04429_MAGBIO Magnolia biondii
MD03G1073700 Malus domestica
MD11G1079700 Malus domestica
Medtr3g462990 Medicago truncatula
Medtr5g069990 Medicago truncatula
MELO3C025865.2 Cucumis melo
Migut.D02091 Erythranthe guttata
MSTRG.18574 Avicennia marina
Nitab4.5_0000010g0190 Nicotiana tabacum
Nitab4.5_0000102g0070 Nicotiana tabacum
Nitab4.5_0001970g0050 Nicotiana tabacum
Nitab4.5_0004144g0020 Nicotiana tabacum
Nn1g03602 Nelumbo nucifera
Nn1g05379 Nelumbo nucifera
Nn2g11406 Nelumbo nucifera
Nn2g13640 Nelumbo nucifera
Nn3g20363 Nelumbo nucifera
Nn4g22044 Nelumbo nucifera
Peaxi162Scf01058g00001 Petunia axillaris
PGR102G1689 Punica granatum
PGSC0003DMG400004165 Solanum tuberosum
PGSC0003DMG400030440 Solanum tuberosum
Phvul.006G065100 Phaseolus vulgaris
Potri.001G249600 Populus trichocarpa
Potri.009G043600 Populus trichocarpa
Prupe.6G060300 Prunus persica
Psat2g059240 Pisum sativum
PSO339G4375 Papaver somniferum
QL01p037422 Quercus lobata
RcHm_v2.0_Chr5g0068741 Rosa chinensis
Rhsim13G0071700 Rhododendron simsii
Sabra09G0031000 Salix brachista
Sabra16G0151600 Salix brachista
Sc06g0008440 Simmondsia chinensis
Sed0014350 Sechium edule
Sed0022374 Sechium edule
SGA_v2.0_scaffold443G51693 Striga asiatica
Solyc06g076790.1 Solanum lycopersicum
Sopen06g033180 Solanum pennellii
Sp5g14660 Schrenkiella parvula
Sp6g20560 Schrenkiella parvula
TAR369G0215 Trochodendron aralioides
THA.LOC104799405 Tarenaya hassleriana
Thecc.09G304900 Theobroma cacao
Thhalv10010831m.g Eutrema salsugineum
Thhalv10015099m.g Eutrema salsugineum
TPR.G13272 Trifolium pratense
TPR.G24035 Trifolium pratense
TWI75G0861 Tripterygium wilfordii
unitig_746.g26735 Utricularia gibba
unitig_899.g15251 Utricularia gibba
vmacro02985 Vaccinium macrocarpon
VMungo0540G1301 Vigna mungo

User provided reference genes

Program Settings