Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p16200 Brassica napus
Aa31LG1G19310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis
Actinidia04301 Actinidia chinensis
Actinidia38322 Actinidia chinensis
Ah.02g128190 Amaranthus hybridus
AL8G34030 Arabidopsis lyrata
Aqoxy2G02328 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea
AT5G57950 Arabidopsis thaliana
ATR0739G206 Amborella trichopoda
Atru.chr7.51 Acer truncatum
AUR62035200 Chenopodium quinoa
BolC9t57830H Brassica oleracea
BraA10t43609Z Brassica rapa
C09p49790 Brassica napus
CAN.G160.58 Capsicum annuum
CANSAT11G2656 Cannabis sativa
CARHR271730 Cardamine hirsuta
Carub.0008s1848 Capsella rubella
Ca_03733_v3 Cicer arietinum L.
Cc06_g14980 Coffea canephora
Cc06_g14990 Coffea canephora
CDE12G0564 Ceratophyllum demersum
Ciclev10009378m.g Citrus clementina
CiPaw.15G168900 Carya illinoinensis
ClCG02G014530 Citrullus lanatus
COL.COLO4_18808 Corchorus olitorius
Cpa.g.sc46.154 Carica papaya
Cre04.g226950 Chlamydomonas reinhardtii
CsaV3_2G007490 Cucumis sativus L.
CSS0045900 Camellia sinensis var. sinensis
DCAR_017909 Daucus carota
Dinv41380 Davidia involucrata
Dinv42856 Davidia involucrata
Dinv43244 Davidia involucrata
Duzib168G0271 Durio zibethinus
Duzib187G1947 Durio zibethinus
ECA247G0266 Erigeron canadensis
EL10As1g23140 Beta vulgaris
EL10As1g23142 Beta vulgaris
EL10As1g23143 Beta vulgaris
Eucgr.C02492 Eucalyptus grandis
Eucgr.C02542 Eucalyptus grandis
FAN11G2737 Fragaria x ananassa
FAN21G3780 Fragaria x ananassa
FAN23G2666 Fragaria x ananassa
FAN25G0559 Fragaria x ananassa
FAN26G2229 Fragaria x ananassa
FAN28G0834 Fragaria x ananassa
FvH4_1g00940 Fragaria vesca
FvH4_3g18530 Fragaria vesca
Glyma.06G219200 Glycine max
Glyma.06G219400 Glycine max
Gohir.A05G055000 Gossypium hirsutum
Gohir.D05G056000 Gossypium hirsutum
Gorai.009G057000 Gossypium raimondii
GSVIVG01023603001 Vitis vinifera
HanXRQChr17g0552351 Helianthus annuus
Haze_19206 Corylus avellana
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla
HPP92_016019 Vanilla planifolia
HPP92_016035 Vanilla planifolia
Hund01517 Selenicereus undatus
Lalb_Chr23g0275681 Lupinus albus
Lj6g0016819 Lotus japonicus
Lj9C717G7 Lonicera japonica
Lsat_1_v5_gn_8_63301 Lactuca sativa
Manes.06G033951 Manihot esculenta
Mapoly0003s0072 Marchantia polymorpha
MCO13G469 Micromonas commoda
MD02G1007700 Malus domestica
MD09G1175000 Malus domestica
Medtr2g460780 Medicago truncatula
MELO3C004136.2 Cucumis melo
Migut.J01341 Erythranthe guttata
MSTRG.19648 Avicennia marina
Nitab4.5_0001571g0010 Nicotiana tabacum
Nitab4.5_0005653g0040 Nicotiana tabacum
Nn8g39891 Nelumbo nucifera
Oeu007777.1 Olea europaea
Oeu017561.1 Olea europaea
Oeu029241.1 Olea europaea
Oeu038698.1 Olea europaea
Oeu049715.1 Olea europaea
Oeu052197.1 Olea europaea
Os09g0420600 Oryza sativa ssp. japonica
Peaxi162Scf00401g00082 Petunia axillaris
PGR102G1797 Punica granatum
PGSC0003DMG401011139 Solanum tuberosum
Phvul.009G195100 Phaseolus vulgaris
Potri.006G184600 Populus trichocarpa
Pp3c16_13530 Physcomitrium patens
Pp3c8_2960 Physcomitrium patens
PRCOL_00000214 Prasinoderma coloniale
Prupe.7G262800 Prunus persica
Psat1g021800 Pisum sativum
PSO063G2086 Papaver somniferum
PSO782G1751 Papaver somniferum
QL02p093215 Quercus lobata
RcHm_v2.0_Chr2g0085671 Rosa chinensis
RcHm_v2.0_Chr5g0031291 Rosa chinensis
Rhsim01G0033400 Rhododendron simsii
Sabra06G0140200 Salix brachista
SalBow1G5910 Salvia bowleyana
Sc08g0005640 Simmondsia chinensis
Sc08g0005650 Simmondsia chinensis
Sed0001225 Sechium edule
Sed0002126 Sechium edule
SEGI_31268 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29569 Striga asiatica
SGA_v2.0_scaffold265G46107 Striga asiatica
SHI02853 Sapria himalayana
SMO361G0248 Selaginella moellendorffii
SMO361G0343 Selaginella moellendorffii
Solyc07g005640.3 Solanum lycopersicum
Sopen07g001740 Solanum pennellii
Sp6g19620 Schrenkiella parvula
TAR636G3217 Trochodendron aralioides
THA.LOC104817821 Tarenaya hassleriana
Thecc.09G030800 Theobroma cacao
Thhalv10014592m.g Eutrema salsugineum
TPR.G20735 Trifolium pratense
TWI32G0918 Tripterygium wilfordii
TWI34G1090 Tripterygium wilfordii
unitig_746.g26584 Utricularia gibba
vmacro05441 Vaccinium macrocarpon
vmacro11582 Vaccinium macrocarpon
vmacro11583 Vaccinium macrocarpon
vmacro16802 Vaccinium macrocarpon
Zm00001eb312980 Zea mays

User provided reference genes

Program Settings