Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p15530 Brassica napus
Aa31LG11G500 Aethionema arabicum
Actinidia13933 Actinidia chinensis
Actinidia29698 Actinidia chinensis
Ah.15g099940 Amaranthus hybridus
AL8G35020 Arabidopsis lyrata
Aqoxy168s004 Aquilegia oxysepala
Aqoxy2G00908 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8F6K17 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B02C3Y Arachis hypogaea
AT5G58740 Arabidopsis thaliana
ATR0618G394 Amborella trichopoda
Atru.chr3.4221 Acer truncatum
AUR62001647 Chenopodium quinoa
AUR62020129 Chenopodium quinoa
BcaB01g04495 Brassica carinata
BcaB01g04639 Brassica carinata
BcaC04g19835 Brassica carinata
BolC9t57942H Brassica oleracea
BraA10t43680Z Brassica rapa
C09p50820 Brassica napus
CAN.G394.126 Capsicum annuum
CANSAT25G1325 Cannabis sativa
CARHR272650 Cardamine hirsuta
Carub.0008s1936 Capsella rubella
Ca_14930_v3 Cicer arietinum L.
Cc05_g09980 Coffea canephora
CDE04G2455 Ceratophyllum demersum
CDE06G1535 Ceratophyllum demersum
CDE06G1924 Ceratophyllum demersum
Cfa011694 Carpinus fangiana
Ciclev10029472m.g Citrus clementina
CiPaw.13G077700 Carya illinoinensis
CiPaw.14G059700 Carya illinoinensis
ClCG03G000770 Citrullus lanatus
COL.COLO4_19156 Corchorus olitorius
Cpa.g.sc62.98 Carica papaya
Cre08.g369400 Chlamydomonas reinhardtii
CsaV3_1G036170 Cucumis sativus L.
CSS0007250 Camellia sinensis var. sinensis
DCAR_011808 Daucus carota
Dinv34391 Davidia involucrata
Duzib150G0199 Durio zibethinus
Duzib168G1045 Durio zibethinus
ECA238G3051 Erigeron canadensis
EL10Ac7g16166 Beta vulgaris
Eucgr.B02255 Eucalyptus grandis
FAN11G3045 Fragaria x ananassa
FAN16G0682 Fragaria x ananassa
FAN21G1466 Fragaria x ananassa
FvH4_3g38540 Fragaria vesca
Glyma.11G175500 Glycine max
Glyma.18G063100 Glycine max
Gohir.A09G090400 Gossypium hirsutum
Gohir.A13G224500 Gossypium hirsutum
Gohir.D09G090500 Gossypium hirsutum
Gohir.D13G229500 Gossypium hirsutum
Gorai.013G260200 Gossypium raimondii
GSVIVG01038735001 Vitis vinifera
HanXRQChr07g0202931 Helianthus annuus
HanXRQChr08g0221811 Helianthus annuus
HanXRQChr12g0382081 Helianthus annuus
Haze_24321 Corylus avellana
Hma1.2p1_0703F.1_g206500 Hydrangea macrophylla
Hma1.2p1_0703F.1_g206510 Hydrangea macrophylla
HPP92_000412 Vanilla planifolia
Hund18849 Selenicereus undatus
Lalb_Chr18g0050921 Lupinus albus
Lj5g0019578 Lotus japonicus
Lj6g0006671 Lotus japonicus
Lj8C68T13 Lonicera japonica
Lsat_1_v5_gn_2_122940 Lactuca sativa
Manes.01G161700 Manihot esculenta
Manes.02G119500 Manihot esculenta
Mapoly0037s0041 Marchantia polymorpha
MBI14_g11284_MAGBIO Magnolia biondii
MBI14_g43437_MAGBIO Magnolia biondii
MCO15G629 Micromonas commoda
MD03G1070800 Malus domestica
MD11G1074800 Malus domestica
Medtr3g463620 Medicago truncatula
MELO3C020551.2 Cucumis melo
Migut.N02895 Erythranthe guttata
MSTRG.22154 Avicennia marina
MSTRG.24458 Avicennia marina
Nitab4.5_0000010g0300 Nicotiana tabacum
Nitab4.5_0008156g0020 Nicotiana tabacum
Nn2g11480 Nelumbo nucifera
Nn2g13704 Nelumbo nucifera
Oeu010994.1 Olea europaea
Oeu025375.1 Olea europaea
Os01g0668000 Oryza sativa ssp. japonica
Peaxi162Scf00540g00427 Petunia axillaris
PGR102G0477 Punica granatum
PGSC0003DMG400030355 Solanum tuberosum
Phvul.006G068000 Phaseolus vulgaris
Potri.001G251204 Populus trichocarpa
Potri.009G046000 Populus trichocarpa
Pp3c16_190 Physcomitrium patens
PRCOL_00004500 Prasinoderma coloniale
Prupe.6G057600 Prunus persica
Psat5g159160 Pisum sativum
PSO339G6415 Papaver somniferum
PSO801G0778 Papaver somniferum
QL01p038261 Quercus lobata
RcHm_v2.0_Chr5g0069441 Rosa chinensis
RcHm_v2.0_Chr6g0251941 Rosa chinensis
Sabra09G0033100 Salix brachista
Sabra16G0152900 Salix brachista
SalBow7G1665 Salvia bowleyana
Sc12g0000690 Simmondsia chinensis
Sed0002691 Sechium edule
Sed0012142 Sechium edule
SEGI_25973 Sequoiadendron giganteum
SGA_v2.0_scaffold92G28310 Striga asiatica
SHI19135 Sapria himalayana
SMO116G0032 Selaginella moellendorffii
Solyc06g076940.3 Solanum lycopersicum
Sopen06g033340 Solanum pennellii
Sp6g20430 Schrenkiella parvula
TAR633G0553 Trochodendron aralioides
TAR636G1782 Trochodendron aralioides
THA.LOC104810714 Tarenaya hassleriana
THA.LOC104811269 Tarenaya hassleriana
THA.LOC104814913 Tarenaya hassleriana
Thecc.09G301900 Theobroma cacao
Thhalv10014898m.g Eutrema salsugineum
TPR.G21179 Trifolium pratense
TWI31G0235 Tripterygium wilfordii
TWI36G1710 Tripterygium wilfordii
vmacro10049 Vaccinium macrocarpon
VMungo0540G1230 Vigna mungo
Zm00001eb110600 Zea mays
Zm00001eb233440 Zea mays

User provided reference genes

Program Settings