Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p25990 Brassica napus
A09p27320 Brassica napus
Aa31LG9G10640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis
Actinidia02051 Actinidia chinensis
Actinidia14511 Actinidia chinensis
Ah.02g116420 Amaranthus hybridus
Ah.12g057730 Amaranthus hybridus
AL6G46500 Arabidopsis lyrata
Aqoxy7G00467 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea
AT4G11790 Arabidopsis thaliana
ATR0757G009 Amborella trichopoda
Atru.chr9.1535 Acer truncatum
AUR62010661 Chenopodium quinoa
AUR62017300 Chenopodium quinoa
BcaB01g01678 Brassica carinata
BcaB05g23807 Brassica carinata
BcaC03g16328 Brassica carinata
BolC2t10164H Brassica oleracea
BolC9t56310H Brassica oleracea
BraA02t07597Z Brassica rapa
BraA09t38298Z Brassica rapa
C02p41470 Brassica napus
C09p34650 Brassica napus
CAN.G981.40 Capsicum annuum
CANSAT21G1670 Cannabis sativa
CARHR254520 Cardamine hirsuta
Carub.0006s3090 Capsella rubella
Ca_06662_v3 Cicer arietinum L.
CBR_g49019 Chara braunii
Cc08_g13930 Coffea canephora
CDE11G0359 Ceratophyllum demersum
Cfa012095 Carpinus fangiana
Ciclev10020090m.g Citrus clementina
CiPaw.11G141700 Carya illinoinensis
CiPaw.12G099000 Carya illinoinensis
ClCG01G003160 Citrullus lanatus
COL.COLO4_05274 Corchorus olitorius
COL.COLO4_05276 Corchorus olitorius
Cpa.g.sc29.9 Carica papaya
Cre01.g049550 Chlamydomonas reinhardtii
CsaV3_5G003280 Cucumis sativus L.
CSS0001301 Camellia sinensis var. sinensis
CSS0012055 Camellia sinensis var. sinensis
DCAR_006764 Daucus carota
Dinv37696 Davidia involucrata
Dinv39015 Davidia involucrata
Duzib068G1011 Durio zibethinus
Duzib084G0260 Durio zibethinus
Duzib205G1286 Durio zibethinus
ECA233G3280 Erigeron canadensis
EL10Ac5g12722 Beta vulgaris
Eucgr.D01927 Eucalyptus grandis
FAN04G0223 Fragaria x ananassa
FAN08G1094 Fragaria x ananassa
FAN13G0947 Fragaria x ananassa
FAN18G3929 Fragaria x ananassa
FvH4_5g01420 Fragaria vesca
Glyma.01G215800 Glycine max
Glyma.11G026600 Glycine max
Gohir.A03G015238 Gossypium hirsutum
Gohir.A08G178400 Gossypium hirsutum
Gohir.D03G155100 Gossypium hirsutum
Gohir.D08G196900 Gossypium hirsutum
Gorai.003G162800 Gossypium raimondii
Gorai.004G207600 Gossypium raimondii
GSVIVG01019866001 Vitis vinifera
HanXRQChr02g0048701 Helianthus annuus
HanXRQChr07g0188541 Helianthus annuus
Haze_08957 Corylus avellana
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla
HPP92_020989 Vanilla planifolia
Hund28361 Selenicereus undatus
Hund28365 Selenicereus undatus
Lalb_Chr05g0214771 Lupinus albus
Lalb_Chr16g0379971 Lupinus albus
Lj2A197T60 Lonicera japonica
Lj2g0007037 Lotus japonicus
Lsat_1_v5_gn_6_12941 Lactuca sativa
Manes.01G068001 Manihot esculenta
Manes.02G028100 Manihot esculenta
MBI04_g40844_MAGBIO Magnolia biondii
MCO13G284 Micromonas commoda
MD04G1068600 Malus domestica
MD06G1071900 Malus domestica
Medtr5g010950 Medicago truncatula
MELO3C005626.2 Cucumis melo
Migut.A00918 Erythranthe guttata
Nitab4.5_0001714g0200 Nicotiana tabacum
Nitab4.5_0009882g0030 Nicotiana tabacum
Nn1g01331 Nelumbo nucifera
Oeu001898.3 Olea europaea
Oeu031590.1 Olea europaea
Os03g0667700 Oryza sativa ssp. japonica
Peaxi162Scf00620g00920 Petunia axillaris
PGR031G2899 Punica granatum
PGSC0003DMG400022755 Solanum tuberosum
Phvul.002G153800 Phaseolus vulgaris
Potri.001G111100 Populus trichocarpa
Potri.003G120900 Populus trichocarpa
PRCOL_00001099 Prasinoderma coloniale
Prupe.5G089600 Prunus persica
Psat2g181520 Pisum sativum
PSO478G0076 Papaver somniferum
PSO782G3262 Papaver somniferum
QL12p017075 Quercus lobata
RcHm_v2.0_Chr7g0199441 Rosa chinensis
Sabra01G0084700 Salix brachista
SalBow5G1829 Salvia bowleyana
SalBow6G0943 Salvia bowleyana
Sc01g0008800 Simmondsia chinensis
Sed0020250 Sechium edule
Sed0020925 Sechium edule
Solyc08g080260.4 Solanum lycopersicum
Sopen08g028610 Solanum pennellii
Sp6g05660 Schrenkiella parvula
TAR374G1484 Trochodendron aralioides
TAR375G0540 Trochodendron aralioides
TAR629G3121 Trochodendron aralioides
THA.LOC104806368 Tarenaya hassleriana
THA.LOC104814292 Tarenaya hassleriana
Thecc.03G270600 Theobroma cacao
Thhalv10028709m.g Eutrema salsugineum
TPR.G6662 Trifolium pratense
TWI60G0251 Tripterygium wilfordii
TWI81G0996 Tripterygium wilfordii
unitig_8.g3899 Utricularia gibba
vmacro00648 Vaccinium macrocarpon
vmacro10803 Vaccinium macrocarpon
VMungo1215G3124 Vigna mungo
Zm00001eb073520 Zea mays

User provided reference genes

Program Settings