Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16190 Brassica napus
Aa31LG7G10880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis
Actinidia08874 Actinidia chinensis
Actinidia36808 Actinidia chinensis
Ah.02g114880 Amaranthus hybridus
AL7G28300 Arabidopsis lyrata
Aqoxy5G03360 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea
AT4G24900 Arabidopsis thaliana
ATR0178G002 Amborella trichopoda
ATR0178G019 Amborella trichopoda
Atru.chr12.1219 Acer truncatum
Atru.chr6.1796 Acer truncatum
AUR62029607 Chenopodium quinoa
AUR62034829 Chenopodium quinoa
AUR62034830 Chenopodium quinoa
BcaC09g52237 Brassica carinata
BcaNung06008 Brassica carinata
BolC1t01947H Brassica oleracea
BraA01t01555Z Brassica rapa
C01p20180 Brassica napus
CANSAT80G2783 Cannabis sativa
CARHR232300 Cardamine hirsuta
Carub.0007s1616 Capsella rubella
Carub.0007s1617 Capsella rubella
Ca_16047_v3 Cicer arietinum L.
CBR_g12751 Chara braunii
Cc04_g08810 Coffea canephora
CDE05G3468 Ceratophyllum demersum
Cfa018793 Carpinus fangiana
Ciclev10031832m.g Citrus clementina
CiPaw.11G006800 Carya illinoinensis
CiPaw.12G043400 Carya illinoinensis
ClCG03G003790 Citrullus lanatus
COL.COLO4_28132 Corchorus olitorius
Cpa.g.sc13.112 Carica papaya
CsaV3_1G009670 Cucumis sativus L.
CSS0001147 Camellia sinensis var. sinensis
CSS0012660 Camellia sinensis var. sinensis
CSS0025658 Camellia sinensis var. sinensis
DCAR_007491 Daucus carota
Dinv11174 Davidia involucrata
Dinv11175 Davidia involucrata
Dinv11177 Davidia involucrata
Dinv23150 Davidia involucrata
Duzib205G0351 Durio zibethinus
ECA247G1629 Erigeron canadensis
EL10Ac5g11407 Beta vulgaris
Eucgr.K02724 Eucalyptus grandis
FAN04G2797 Fragaria x ananassa
FAN08G1998 Fragaria x ananassa
FAN13G2030 Fragaria x ananassa
FAN18G4115 Fragaria x ananassa
FvH4_5g08360 Fragaria vesca
Glyma.06G170000 Glycine max
Gohir.A07G051066 Gossypium hirsutum
Gohir.A07G051132 Gossypium hirsutum
Gohir.D07G055466 Gossypium hirsutum
Gohir.D07G055532 Gossypium hirsutum
Gorai.001G058800 Gossypium raimondii
GSVIVG01008547001 Vitis vinifera
HanXRQChr13g0408711 Helianthus annuus
Haze_07141 Corylus avellana
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla
HPP92_013611 Vanilla planifolia
Hund02443 Selenicereus undatus
Lalb_Chr08g0237181 Lupinus albus
Lalb_Chr08g0237201 Lupinus albus
Lalb_Chr11g0069551 Lupinus albus
Lj1g0008882 Lotus japonicus
Lj9A479T55 Lonicera japonica
Lsat_1_v5_gn_1_33221 Lactuca sativa
Manes.14G051001 Manihot esculenta
Manes.14G051101 Manihot esculenta
Mapoly0096s0043 Marchantia polymorpha
Mapoly0096s0044 Marchantia polymorpha
MBI11_g05331_MAGBIO Magnolia biondii
MD06G1141400 Malus domestica
MD14G1156600 Malus domestica
Medtr2g045235 Medicago truncatula
Medtr2g045240 Medicago truncatula
Medtr2g045245 Medicago truncatula
Medtr3g099220 Medicago truncatula
MELO3C002363.2 Cucumis melo
Migut.O00254 Erythranthe guttata
Nitab4.5_0001180g0250 Nicotiana tabacum
Nitab4.5_0010950g0010 Nicotiana tabacum
Oeu016044.4 Olea europaea
Oeu058729.2 Olea europaea
Os09g0506900 Oryza sativa ssp. japonica
Peaxi162Scf00171g00421 Petunia axillaris
PGSC0003DMG400025629 Solanum tuberosum
Phvul.009G166301 Phaseolus vulgaris
Potri.012G098000 Populus trichocarpa
Potri.015G096700 Populus trichocarpa
Pp3c6_21480 Physcomitrium patens
Prupe.5G150700 Prunus persica
Psat5g051400 Pisum sativum
PSO478G1623 Papaver somniferum
QL10p002869 Quercus lobata
RcHm_v2.0_Chr7g0190081 Rosa chinensis
RcHm_v2.0_Chr7g0190091 Rosa chinensis
Rhsim12G0175100 Rhododendron simsii
Sabra15G0117400 Salix brachista
Sabra15G0117500 Salix brachista
SalBow8G2935 Salvia bowleyana
Sc22g0003840 Simmondsia chinensis
Sed0001636 Sechium edule
SEGI_03962 Sequoiadendron giganteum
SEGI_07598 Sequoiadendron giganteum
SEGI_29979 Sequoiadendron giganteum
SGA_v2.0_scaffold164G38120 Striga asiatica
SHI10578 Sapria himalayana
SMO133G0032 Selaginella moellendorffii
Solyc03g098330.2 Solanum lycopersicum
Sopen03g029080 Solanum pennellii
Sp7g22880 Schrenkiella parvula
TAR371G0929 Trochodendron aralioides
TAR629G0711 Trochodendron aralioides
THA.LOC104825017 Tarenaya hassleriana
Thecc.03G129500 Theobroma cacao
Thhalv10025155m.g Eutrema salsugineum
TPR.G14211 Trifolium pratense
TWI23G1188 Tripterygium wilfordii
unitig_26.g9610 Utricularia gibba
vmacro16719 Vaccinium macrocarpon
vmacro16720 Vaccinium macrocarpon
VMungo1309G0122 Vigna mungo
Zm00001eb102430 Zea mays
Zm00001eb317740 Zea mays

User provided reference genes

Program Settings