Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p52850 Brassica napus
Aa31LG10G14950 Aethionema arabicum
Aa31sc27G80 Aethionema arabicum
Aa31sc27G90 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1567 Anthoceros agrestis
Actinidia12678 Actinidia chinensis
Actinidia28320 Actinidia chinensis
Actinidia33479 Actinidia chinensis
Ah.05g173870 Amaranthus hybridus
Ah.05g173880 Amaranthus hybridus
AL5G42970 Arabidopsis lyrata
Aqoxy7G00743 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GQKS8P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I9SF1K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LXE9FZ Arachis hypogaea
AT3G60660 Arabidopsis thaliana
ATR1153G072 Amborella trichopoda
Atru.chr5.259 Acer truncatum
AUR62004168 Chenopodium quinoa
AUR62013665 Chenopodium quinoa
BcaC07g40584 Brassica carinata
BolC4t24754H Brassica oleracea
BolC8t51149H Brassica oleracea
BraA09t40717Z Brassica rapa
C08p35600 Brassica napus
CAN.G106.25 Capsicum annuum
CANSAT56G0664 Cannabis sativa
CARHR170760 Cardamine hirsuta
CARHR171060 Cardamine hirsuta
Carub.0005s2739 Capsella rubella
Carub.0005s2750 Capsella rubella
Ca_02431_v3 Cicer arietinum L.
CBR_g48776 Chara braunii
Cc00_g05150 Coffea canephora
Cc00_g05160 Coffea canephora
Cc02_g24280 Coffea canephora
CDE04G3422 Ceratophyllum demersum
Cfa011175 Carpinus fangiana
Ciclev10021687m.g Citrus clementina
CiPaw.13G033000 Carya illinoinensis
ClCG09G008930 Citrullus lanatus
COL.COLO4_12497 Corchorus olitorius
Cpa.g.sc49.162 Carica papaya
Cre16.g672500 Chlamydomonas reinhardtii
CsaV3_7G026130 Cucumis sativus L.
CSS0000774 Camellia sinensis var. sinensis
DCAR_025098 Daucus carota
Dinv44124 Davidia involucrata
Dinv44127 Davidia involucrata
Duzib133G1160 Durio zibethinus
ECA234G0875 Erigeron canadensis
EL10Ac1g00841 Beta vulgaris
Eucgr.D02489 Eucalyptus grandis
FAN01G2984 Fragaria x ananassa
FAN03G0348 Fragaria x ananassa
FAN03G0906 Fragaria x ananassa
FAN03G1851 Fragaria x ananassa
FAN06G0568 Fragaria x ananassa
FAN06G1875 Fragaria x ananassa
FAN06G3617 Fragaria x ananassa
FAN10G1300 Fragaria x ananassa
FAN10G3200 Fragaria x ananassa
FAN10G4230 Fragaria x ananassa
FvH4_7g11150 Fragaria vesca
Glyma.01G137000 Glycine max
Glyma.03G031466 Glycine max
Glyma.03G031532 Glycine max
Gohir.A12G094400 Gossypium hirsutum
Gohir.D12G097200 Gossypium hirsutum
Gorai.008G105800 Gossypium raimondii
GSVIVG01027639001 Vitis vinifera
HanXRQChr03g0088101 Helianthus annuus
Haze_02673 Corylus avellana
Hma1.2p1_0072F.1_g038280 Hydrangea macrophylla
Hund27376 Selenicereus undatus
Lalb_Chr12g0208011 Lupinus albus
Lalb_Chr12g0208021 Lupinus albus
Lj3g0015572 Lotus japonicus
Lsat_1_v5_gn_4_44621 Lactuca sativa
Manes.05G048500 Manihot esculenta
Mapoly0010s0189 Marchantia polymorpha
MD02G1209900 Malus domestica
Medtr4g026180 Medicago truncatula
MELO3C021033.2 Cucumis melo
Migut.B01600 Erythranthe guttata
MSTRG.17165 Avicennia marina
Nitab4.5_0001329g0060 Nicotiana tabacum
Nitab4.5_0005050g0030 Nicotiana tabacum
Nn6g34003 Nelumbo nucifera
Oeu045806.1 Olea europaea
Oeu051925.1 Olea europaea
Oeu051926.1 Olea europaea
Oeu055514.1 Olea europaea
Os07g0484500 Oryza sativa ssp. japonica
Peaxi162Scf01052g00014 Petunia axillaris
PGR042G3152 Punica granatum
PGSC0003DMG400007022 Solanum tuberosum
Phvul.010G077700 Phaseolus vulgaris
Potri.014G060000 Populus trichocarpa
Pp3c6_12030 Physcomitrium patens
Prupe.2G138600 Prunus persica
Psat7g217800 Pisum sativum
PSO017G7043 Papaver somniferum
PSO478G1061 Papaver somniferum
QL04p039160 Quercus lobata
RcHm_v2.0_Chr1g0349161 Rosa chinensis
RcHm_v2.0_Chr1g0349171 Rosa chinensis
RcHm_v2.0_Chr1g0349201 Rosa chinensis
RcHm_v2.0_Chr1g0349231 Rosa chinensis
RcHm_v2.0_Chr1g0349241 Rosa chinensis
RcHm_v2.0_Chr1g0349251 Rosa chinensis
RcHm_v2.0_Chr5g0028911 Rosa chinensis
Rhsim01G0150000 Rhododendron simsii
Sabra14G0043900 Salix brachista
SalBow5G5068 Salvia bowleyana
Sc02g0002770 Simmondsia chinensis
Sed0027573 Sechium edule
SGA_v2.0_scaffold153G36973 Striga asiatica
SHI22577 Sapria himalayana
SHI22578 Sapria himalayana
SMO347G0664 Selaginella moellendorffii
Solyc05g050900.4 Solanum lycopersicum
Sopen05g029380 Solanum pennellii
Sp5g02580 Schrenkiella parvula
TAR375G0251 Trochodendron aralioides
TAR375G0577 Trochodendron aralioides
THA.LOC104802463 Tarenaya hassleriana
Thecc.01G381900 Theobroma cacao
Thhalv10006164m.g Eutrema salsugineum
TPR.G5024 Trifolium pratense
TWI23G1076 Tripterygium wilfordii
vmacro21028 Vaccinium macrocarpon
VMungo0331G0187 Vigna mungo
Zm00001eb321530 Zea mays

User provided reference genes

Program Settings