Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p04740 Brassica napus
Aa31LG1G26140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis
Actinidia21608 Actinidia chinensis
Actinidia33294 Actinidia chinensis
Ah.14g086050 Amaranthus hybridus
AL4G43620 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea
AT2G44580 Arabidopsis thaliana
ATR0585G014 Amborella trichopoda
Atru.chr5.133 Acer truncatum
Atru.chr5.134 Acer truncatum
Atru.chr5.24 Acer truncatum
Atru.chr5.52 Acer truncatum
AUR62027448 Chenopodium quinoa
AUR62031252 Chenopodium quinoa
BcaB02g08835 Brassica carinata
BcaC02g12292 Brassica carinata
BolC4t22185H Brassica oleracea
BraA05t19450Z Brassica rapa
C04p05550 Brassica napus
CAN.G1480.2 Capsicum annuum
CAN.G195.32 Capsicum annuum
CAN.G195.33 Capsicum annuum
CAN.G74.38 Capsicum annuum
CAN.G74.39 Capsicum annuum
CANSAT21G0894 Cannabis sativa
CARHR139800 Cardamine hirsuta
Carub.0004s2713 Capsella rubella
Ca_03850_v3 Cicer arietinum L.
Cc02_g25760 Coffea canephora
CDE06G2636 Ceratophyllum demersum
Ciclev10020482m.g Citrus clementina
CiPaw.13G020800 Carya illinoinensis
ClCG05G002770 Citrullus lanatus
COL.COLO4_19318 Corchorus olitorius
Cpa.g.sc3387.1 Carica papaya
Cre16.g684155 Chlamydomonas reinhardtii
CsaV3_3G010280 Cucumis sativus L.
CSS0042045 Camellia sinensis var. sinensis
Dinv43574 Davidia involucrata
Dinv43575 Davidia involucrata
Duzib128G1323 Durio zibethinus
ECA234G4178 Erigeron canadensis
EL10Ac6g13432 Beta vulgaris
EL10Ac8g19272 Beta vulgaris
Eucgr.D01150 Eucalyptus grandis
FAN23G2651 Fragaria x ananassa
FAN26G0835 Fragaria x ananassa
FAN28G0191 Fragaria x ananassa
FvH4_1g25731 Fragaria vesca
Glyma.04G128400 Glycine max
Glyma.06G310400 Glycine max
Gohir.A10G242600 Gossypium hirsutum
Gohir.D10G254600 Gossypium hirsutum
Gorai.011G295600 Gossypium raimondii
GSVIVG01018417001 Vitis vinifera
GSVIVG01018418001 Vitis vinifera
GSVIVG01029190001 Vitis vinifera
HanXRQChr07g0197891 Helianthus annuus
HanXRQChr07g0198081 Helianthus annuus
HanXRQChr12g0366931 Helianthus annuus
HanXRQChr16g0519531 Helianthus annuus
Haze_02923 Corylus avellana
HPP92_011679 Vanilla planifolia
HPP92_011699 Vanilla planifolia
HPP92_011700 Vanilla planifolia
Hund17139 Selenicereus undatus
Lalb_Chr19g0126311 Lupinus albus
Lj1g0019008 Lotus japonicus
Lj7C553T5 Lonicera japonica
Lsat_1_v5_gn_4_46040 Lactuca sativa
Manes.05G060100 Manihot esculenta
Mapoly0001s0452 Marchantia polymorpha
MBI05_g22048_MAGBIO Magnolia biondii
MBI14_g08084_MAGBIO Magnolia biondii
MCO12G177 Micromonas commoda
MD02G1227400 Malus domestica
MD07G1086000 Malus domestica
Medtr0103s0100 Medicago truncatula
MELO3C006251.2 Cucumis melo
Migut.B01472 Erythranthe guttata
MSTRG.20650 Avicennia marina
Nitab4.5_0009219g0010 Nicotiana tabacum
Nitab4.5_0013532g0010 Nicotiana tabacum
Nn1g00612 Nelumbo nucifera
Nn1g07357 Nelumbo nucifera
Nn1g07358 Nelumbo nucifera
Nn2g10726 Nelumbo nucifera
Nn3g19112 Nelumbo nucifera
Nn3g19415 Nelumbo nucifera
Nn3g19416 Nelumbo nucifera
Oeu024375.1 Olea europaea
Oeu024376.1 Olea europaea
Os05g0119600 Oryza sativa ssp. japonica
Peaxi162Scf00417g00029 Petunia axillaris
Peaxi162Scf01124g00121 Petunia axillaris
PGR004G0434 Punica granatum
PGR004G1878 Punica granatum
PGSC0003DMG400001703 Solanum tuberosum
Phvul.005G016200 Phaseolus vulgaris
Potri.001G346900 Populus trichocarpa
Pp3c5_22720 Physcomitrium patens
PRCOL_00005399 Prasinoderma coloniale
Prupe.2G112300 Prunus persica
Prupe.2G112400 Prunus persica
Prupe.2G112500 Prunus persica
Psat3g172680 Pisum sativum
PSO017G1219 Papaver somniferum
PSO063G7295 Papaver somniferum
PSO782G4885 Papaver somniferum
QL04p025438 Quercus lobata
RcHm_v2.0_Chr1g0343251 Rosa chinensis
Rhsim01G0145000 Rhododendron simsii
Sabra16G0226600 Salix brachista
Sc26g0001830 Simmondsia chinensis
Sed0012756 Sechium edule
SEGI_02869 Sequoiadendron giganteum
SEGI_41477 Sequoiadendron giganteum
SGA_v2.0_scaffold17G08178 Striga asiatica
Solyc01g088390.3 Solanum lycopersicum
Sopen01g035220 Solanum pennellii
Sp4g26670 Schrenkiella parvula
TAR375G0441 Trochodendron aralioides
TAR375G0847 Trochodendron aralioides
THA.LOC104817171 Tarenaya hassleriana
Thecc.10G001400 Theobroma cacao
Thhalv10001723m.g Eutrema salsugineum
TPR.G30814 Trifolium pratense
TWI59G0898 Tripterygium wilfordii
unitig_52.g17377 Utricularia gibba
vmacro21093 Vaccinium macrocarpon
VMungo1080G0989 Vigna mungo
Zm00001eb112030 Zea mays

User provided reference genes

Program Settings