Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25720 Brassica napus
A06p19660 Brassica napus
A09p07830 Brassica napus
Aa31LG11G960 Aethionema arabicum
Aa31LG4G16620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis
Actinidia04922 Actinidia chinensis
AL5G27300 Arabidopsis lyrata
AL8G39690 Arabidopsis lyrata
Aqoxy3G00785 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea
AT3G47980 Arabidopsis thaliana
AT5G62720 Arabidopsis thaliana
ATR0665G316 Amborella trichopoda
Atru.chr9.2321 Acer truncatum
AUR62008352 Chenopodium quinoa
AUR62021745 Chenopodium quinoa
BcaB01g00857 Brassica carinata
BcaB02g09676 Brassica carinata
BcaB02g09686 Brassica carinata
BcaB05g22893 Brassica carinata
BcaC01g01754 Brassica carinata
BcaC01g02511 Brassica carinata
BcaC04g23395 Brassica carinata
BcaC09g49836 Brassica carinata
BcaNung01383 Brassica carinata
BcaNung07157 Brassica carinata
BolC1t03180H Brassica oleracea
BolC3t18656H Brassica oleracea
BolC3t19521H Brassica oleracea
BolC9t53794H Brassica oleracea
BraA01t02488Z Brassica rapa
BraA06t25046Z Brassica rapa
BraA06t25896Z Brassica rapa
BraA09t36434Z Brassica rapa
C01p32410 Brassica napus
C03p72260 Brassica napus
C09p08810 Brassica napus
C09p08830 Brassica napus
CAN.G4519.1 Capsicum annuum
CANSAT80G0862 Cannabis sativa
CARHR156700 Cardamine hirsuta
CARHR276510 Cardamine hirsuta
Carub.0005s1409 Capsella rubella
Carub.0008s2345 Capsella rubella
Ca_21851_v3 Cicer arietinum L.
Cc04_g15610 Coffea canephora
CDE02G2117 Ceratophyllum demersum
Cfa005086 Carpinus fangiana
Ciclev10021819m.g Citrus clementina
CiPaw.11G037800 Carya illinoinensis
ClCG01G014370 Citrullus lanatus
COL.COLO4_37386 Corchorus olitorius
Cpa.g.sc414.2 Carica papaya
Cre06.g295826 Chlamydomonas reinhardtii
CsaV3_1G007940 Cucumis sativus L.
DCAR_026077 Daucus carota
Dinv38663 Davidia involucrata
Duzib084G0674 Durio zibethinus
ECA247G3495 Erigeron canadensis
EL10Ac5g10940 Beta vulgaris
Eucgr.B00422 Eucalyptus grandis
FAN04G0326 Fragaria x ananassa
FAN08G2559 Fragaria x ananassa
FAN13G2643 Fragaria x ananassa
FAN18G3372 Fragaria x ananassa
FvH4_5g15530 Fragaria vesca
Glyma.05G030200 Glycine max
Glyma.17G096600 Glycine max
Gohir.A07G065400 Gossypium hirsutum
Gohir.D07G069900 Gossypium hirsutum
Gorai.001G073800 Gossypium raimondii
GSVIVG01008066001 Vitis vinifera
HanXRQChr02g0045201 Helianthus annuus
Haze_07383 Corylus avellana
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla
Hund02671 Selenicereus undatus
Lalb_Chr13g0303431 Lupinus albus
Lj4g0017253 Lotus japonicus
Lj9A459G48 Lonicera japonica
Lsat_1_v5_gn_1_10700 Lactuca sativa
Manes.14G074300 Manihot esculenta
Mapoly0029s0058 Marchantia polymorpha
MBI03_g20464_MAGBIO Magnolia biondii
MCO14G168 Micromonas commoda
MD06G1187500 Malus domestica
MD14G1193900 Malus domestica
Medtr4g107630 Medicago truncatula
MELO3C002210.2 Cucumis melo
Migut.D01857 Erythranthe guttata
MSTRG.4407 Avicennia marina
Nitab4.5_0004605g0110 Nicotiana tabacum
Nitab4.5_0005402g0010 Nicotiana tabacum
Nn4g23032 Nelumbo nucifera
Oeu048731.1 Olea europaea
Os03g0684700 Oryza sativa ssp. japonica
Peaxi162Scf00009g00426 Petunia axillaris
PGR083G0992 Punica granatum
PGR083G2169 Punica granatum
PGSC0003DMG400025332 Solanum tuberosum
Phvul.003G193000 Phaseolus vulgaris
Potri.015G065500 Populus trichocarpa
Prupe.5G185800 Prunus persica
PSO017G2472 Papaver somniferum
PSO478G3339 Papaver somniferum
QL10p015507 Quercus lobata
QL10p015509 Quercus lobata
RcHm_v2.0_Chr7g0180561 Rosa chinensis
Rhsim08G0160200 Rhododendron simsii
Sabra12G0050500 Salix brachista
Sabra15G0090700 Salix brachista
SalBow7G0869 Salvia bowleyana
Sc12g0006170 Simmondsia chinensis
Sed0018874 Sechium edule
Sed0020047 Sechium edule
SEGI_40570 Sequoiadendron giganteum
SGA_v2.0_scaffold7G04086 Striga asiatica
SMO356G0151 Selaginella moellendorffii
Solyc03g113280.3 Solanum lycopersicum
Sopen03g032340 Solanum pennellii
Sp2g25890 Schrenkiella parvula
Sp5g14000 Schrenkiella parvula
TAR481G0014 Trochodendron aralioides
THA.LOC104821456 Tarenaya hassleriana
Thecc.03G078500 Theobroma cacao
Thhalv10004798m.g Eutrema salsugineum
Thhalv10010656m.g Eutrema salsugineum
TPR.G38380 Trifolium pratense
TWI60G1143 Tripterygium wilfordii
unitig_0.g783 Utricularia gibba
vmacro19431 Vaccinium macrocarpon
VMungo1215G0702 Vigna mungo
Zm00001eb053360 Zea mays
Zm00001eb217240 Zea mays

User provided reference genes

Program Settings