Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p22940 Brassica napus
Aa31LG10G11340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2815 Anthoceros agrestis
Actinidia31644 Actinidia chinensis
Ah.10g030630 Amaranthus hybridus
AL5G37780 Arabidopsis lyrata
AL5G37790 Arabidopsis lyrata
Aqoxy2G00691 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B7UYEY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PBP7IS Arachis hypogaea
AT3G56460 Arabidopsis thaliana
ATR1127G121 Amborella trichopoda
Atru.chr12.209 Acer truncatum
AUR62031667 Chenopodium quinoa
AUR62032550 Chenopodium quinoa
BcaB02g07651 Brassica carinata
BcaC08g44785 Brassica carinata
BolC6t37528H Brassica oleracea
BraA07t29959Z Brassica rapa
C06p23560 Brassica napus
CAN.G77.10 Capsicum annuum
CANSAT56G2835 Cannabis sativa
CARHR166580 Cardamine hirsuta
Carub.0005s2323 Capsella rubella
Ca_16850_v3 Cicer arietinum L.
Cc02_g05050 Coffea canephora
CDE04G1295 Ceratophyllum demersum
CDE10G1308 Ceratophyllum demersum
CDE12G0791 Ceratophyllum demersum
Cfa001181 Carpinus fangiana
Ciclev10031975m.g Citrus clementina
CiPaw.02G199500 Carya illinoinensis
ClCG11G005490 Citrullus lanatus
COL.COLO4_19494 Corchorus olitorius
Cpa.g.c38712.1 Carica papaya
Cpa.g.sc1097.1 Carica papaya
Cre16.g674050 Chlamydomonas reinhardtii
CsaV3_5G039240 Cucumis sativus L.
CSS0010135 Camellia sinensis var. sinensis
DCAR_014656 Daucus carota
DCAR_018050 Daucus carota
Dinv21869 Davidia involucrata
Duzib106G2079 Durio zibethinus
ECA233G0423 Erigeron canadensis
ECA233G3482 Erigeron canadensis
EL10Ac2g02691 Beta vulgaris
Eucgr.G03169 Eucalyptus grandis
FAN06G4413 Fragaria x ananassa
FAN10G1145 Fragaria x ananassa
FvH4_2g12150 Fragaria vesca
FvH4_7g26290 Fragaria vesca
Glyma.04G224400 Glycine max
Glyma.06G140300 Glycine max
Gohir.A05G276800 Gossypium hirsutum
Gohir.A13G008400 Gossypium hirsutum
Gohir.A13G008500 Gossypium hirsutum
Gohir.D05G278500 Gossypium hirsutum
Gohir.D13G009100 Gossypium hirsutum
Gohir.D13G009200 Gossypium hirsutum
Gorai.009G292000 Gossypium raimondii
Gorai.013G009900 Gossypium raimondii
GSVIVG01032867001 Vitis vinifera
HanXRQChr02g0050001 Helianthus annuus
HanXRQChr05g0144231 Helianthus annuus
HanXRQChr08g0222851 Helianthus annuus
HanXRQChr08g0222991 Helianthus annuus
HanXRQChr17g0559391 Helianthus annuus
Hma1.2p1_0264F.1_g105800 Hydrangea macrophylla
Hma1.2p1_0264F.1_g105810 Hydrangea macrophylla
HPP92_024985 Vanilla planifolia
HPP92_024988 Vanilla planifolia
HPP92_024990 Vanilla planifolia
Hund13427 Selenicereus undatus
Lalb_Chr08g0239301 Lupinus albus
Lj1A970G57 Lonicera japonica
Lj1g0000176 Lotus japonicus
Lsat_1_v5_gn_8_11160 Lactuca sativa
Lsat_1_v5_gn_8_11180 Lactuca sativa
Manes.10G004300 Manihot esculenta
Mapoly0006s0302 Marchantia polymorpha
MBI15_g31024_MAGBIO Magnolia biondii
MBI15_g31027_MAGBIO Magnolia biondii
MCO07G403 Micromonas commoda
MD00G1044900 Malus domestica
MD07G1238300 Malus domestica
MD11G1140100 Malus domestica
Medtr3g093620 Medicago truncatula
MELO3C022102.2 Cucumis melo
Migut.F01222 Erythranthe guttata
MSTRG.153 Avicennia marina
Nitab4.5_0000103g0040 Nicotiana tabacum
Nitab4.5_0001493g0030 Nicotiana tabacum
Nn2g10215 Nelumbo nucifera
Oeu044175.1 Olea europaea
Os05g0313500 Oryza sativa ssp. japonica
Peaxi162Scf00073g02117 Petunia axillaris
PGR044G2580 Punica granatum
Phvul.009G041600 Phaseolus vulgaris
Potri.019G065700 Populus trichocarpa
Pp3c16_1190 Physcomitrium patens
PRCOL_00005743 Prasinoderma coloniale
Psat5g069880 Pisum sativum
PSO339G3520 Papaver somniferum
PSO384G5040 Papaver somniferum
QL08p065276 Quercus lobata
RcHm_v2.0_Chr1g0372751 Rosa chinensis
RcHm_v2.0_Chr5g0036601 Rosa chinensis
Rhsim03G0154600 Rhododendron simsii
Rhsim03G0154800 Rhododendron simsii
Sabra19G0078900 Salix brachista
SalBow2G0183 Salvia bowleyana
SalBow5G4812 Salvia bowleyana
Sc14g0005690 Simmondsia chinensis
Sed0013812 Sechium edule
SEGI_06672 Sequoiadendron giganteum
SGA_v2.0_scaffold78G25489 Striga asiatica
SMO164G0125 Selaginella moellendorffii
Solyc03g095320.1 Solanum lycopersicum
Solyc03g095350.3 Solanum lycopersicum
Solyc03g095360.3 Solanum lycopersicum
Sopen03g025370 Solanum pennellii
Sopen03g025380 Solanum pennellii
Sp5g06080 Schrenkiella parvula
TAR636G2576 Trochodendron aralioides
THA.LOC104803216 Tarenaya hassleriana
Thecc.10G187200 Theobroma cacao
Thhalv10006076m.g Eutrema salsugineum
TPR.G13959 Trifolium pratense
TWI09G0105 Tripterygium wilfordii
unitig_736.g22425 Utricularia gibba
vmacro06873 Vaccinium macrocarpon
vmacro06874 Vaccinium macrocarpon
VMungo1309G2173 Vigna mungo
Zm00001eb070150 Zea mays

User provided reference genes

Program Settings