Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42980 Brassica napus
A06p30370 Brassica napus
A09p08410 Brassica napus
A10p28030 Brassica napus
Aa31LG1G18100 Aethionema arabicum
Aa31LG3G17810 Aethionema arabicum
Actinidia06595 Actinidia chinensis
Actinidia20052 Actinidia chinensis
Ah.02g117510 Amaranthus hybridus
AL6G19500 Arabidopsis lyrata
AL8G41000 Arabidopsis lyrata
Aqoxy5G02357 Aquilegia oxysepala
Aqoxy6G00248 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3M3TNE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C42KQG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VEXL9Z Arachis hypogaea
AT5G08750 Arabidopsis thaliana
AT5G63780 Arabidopsis thaliana
ATR0584G091 Amborella trichopoda
Atru.chr4.1096 Acer truncatum
Atru.chr4.1101 Acer truncatum
AUR62000544 Chenopodium quinoa
AUR62006895 Chenopodium quinoa
BcaB02g09731 Brassica carinata
BcaB07g29704 Brassica carinata
BcaB08g37228 Brassica carinata
BcaC03g18224 Brassica carinata
BcaC04g23352 Brassica carinata
BcaNung04640 Brassica carinata
BolC2t12367H Brassica oleracea
BolC3t18524H Brassica oleracea
BolC9t53864H Brassica oleracea
BolC9t59571H Brassica oleracea
BraA02t09221Z Brassica rapa
BraA06t25985Z Brassica rapa
BraA09t36491Z Brassica rapa
BraA10t44852Z Brassica rapa
C02p62930 Brassica napus
C03p62660 Brassica napus
C09p09520 Brassica napus
C09p68230 Brassica napus
CANSAT01G3009 Cannabis sativa
CARHR204250 Cardamine hirsuta
CARHR277690 Cardamine hirsuta
Carub.0006s0772 Capsella rubella
Carub.0008s2455 Capsella rubella
Ca_17614_v3 Cicer arietinum L.
CBR_g11166 Chara braunii
Cc07_g19420 Coffea canephora
CDE02G2795 Ceratophyllum demersum
CDE04G3370 Ceratophyllum demersum
CDE08G0762 Ceratophyllum demersum
Ciclev10001627m.g Citrus clementina
CiPaw.03G116400 Carya illinoinensis
CiPaw.04G077800 Carya illinoinensis
ClCG04G002030 Citrullus lanatus
COL.COLO4_12108 Corchorus olitorius
Cpa.g.sc37.31 Carica papaya
CsaV3_4G030700 Cucumis sativus L.
CSS0012446 Camellia sinensis var. sinensis
DCAR_009613 Daucus carota
Dinv08209 Davidia involucrata
Dinv30333 Davidia involucrata
Duzib147G0616 Durio zibethinus
Duzib187G1464 Durio zibethinus
EL10Ac4g09673 Beta vulgaris
Eucgr.H05084 Eucalyptus grandis
FAN19G1481 Fragaria x ananassa
FAN23G1161 Fragaria x ananassa
FAN26G1144 Fragaria x ananassa
FAN28G0848 Fragaria x ananassa
FvH4_1g25260 Fragaria vesca
Glyma.08G002800 Glycine max
Gohir.A05G382300 Gossypium hirsutum
Gohir.D04G032900 Gossypium hirsutum
Gorai.012G037300 Gossypium raimondii
GSVIVG01022361001 Vitis vinifera
GSVIVG01022362001 Vitis vinifera
Haze_25352 Corylus avellana
Hma1.2p1_0134F.1_g061560 Hydrangea macrophylla
Hma1.2p1_1509F.1_g287810 Hydrangea macrophylla
HPP92_006885 Vanilla planifolia
Hund07218 Selenicereus undatus
Hund21795 Selenicereus undatus
Lalb_Chr07g0184211 Lupinus albus
Lalb_Chr12g0202971 Lupinus albus
Lj4A829G19 Lonicera japonica
Lj4g0020231 Lotus japonicus
Manes.12G080700 Manihot esculenta
MBI03_g07925_MAGBIO Magnolia biondii
MBI03_g47987_MAGBIO Magnolia biondii
MD15G1137500 Malus domestica
Medtr8g094610 Medicago truncatula
MELO3C008933.2 Cucumis melo
Migut.H00831 Erythranthe guttata
MSTRG.23483 Avicennia marina
Nitab4.5_0005072g0010 Nicotiana tabacum
Nitab4.5_0009076g0020 Nicotiana tabacum
Nn5g28351 Nelumbo nucifera
Oeu050099.1 Olea europaea
Os04g0692300 Oryza sativa ssp. japonica
PGR102G1848 Punica granatum
Phvul.002G275300 Phaseolus vulgaris
Potri.005G070100 Populus trichocarpa
Potri.007G098900 Populus trichocarpa
Prupe.4G280400 Prunus persica
Psat7g043760 Pisum sativum
PSO170G2893 Papaver somniferum
PSO528G0111 Papaver somniferum
QL10p040426 Quercus lobata
RcHm_v2.0_Chr2g0123181 Rosa chinensis
Rhsim10G0128700 Rhododendron simsii
Sabra05G0057000 Salix brachista
Sc16g0009640 Simmondsia chinensis
Sed0017157 Sechium edule
SEGI_27099 Sequoiadendron giganteum
SGA_v2.0_scaffold20G08960 Striga asiatica
Sp2g26850 Schrenkiella parvula
Sp6g34120 Schrenkiella parvula
TAR381G1701 Trochodendron aralioides
TAR625G0825 Trochodendron aralioides
THA.LOC104800223 Tarenaya hassleriana
THA.LOC104818413 Tarenaya hassleriana
THA.LOC104819352 Tarenaya hassleriana
Thecc.01G141100 Theobroma cacao
Thhalv10004833m.g Eutrema salsugineum
Thhalv10013926m.g Eutrema salsugineum
TPR.G15607 Trifolium pratense
TPR.G37372 Trifolium pratense
TPR.G3966 Trifolium pratense
TWI75G1048 Tripterygium wilfordii
TWI79G1634 Tripterygium wilfordii
vmacro12767 Vaccinium macrocarpon
VMungo0251G2363 Vigna mungo
Zm00001eb434500 Zea mays

User provided reference genes

Program Settings