Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p38160 Brassica napus
Aa31LG4G8620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1873 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.354 Anthoceros agrestis
Actinidia23338 Actinidia chinensis
Ah.05g178250 Amaranthus hybridus
AL2G31600 Arabidopsis lyrata
Aqoxy6G00159 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.U09KPS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UXJV1A Arachis hypogaea
AT1G71990 Arabidopsis thaliana
ATR0584G227 Amborella trichopoda
Atru.chr13.1732 Acer truncatum
AUR62004634 Chenopodium quinoa
AUR62022702 Chenopodium quinoa
BcaB03g14921 Brassica carinata
BcaB05g23155 Brassica carinata
BcaC08g46643 Brassica carinata
BcaC08g46644 Brassica carinata
BolC6t39662H Brassica oleracea
BraA07t31381Z Brassica rapa
C06p46090 Brassica napus
CAN.G308.72 Capsicum annuum
CANSAT25G2274 Cannabis sativa
CARHR064810 Cardamine hirsuta
Carub.0002s1877 Capsella rubella
Ca_10625_v3 Cicer arietinum L.
CBR_g41226 Chara braunii
Cc00_g23910 Coffea canephora
CDE06G2084 Ceratophyllum demersum
CDE08G0118 Ceratophyllum demersum
Cfa013840 Carpinus fangiana
Ciclev10001278m.g Citrus clementina
CiPaw.08G058400 Carya illinoinensis
ClCG08G008690 Citrullus lanatus
COL.COLO4_23644 Corchorus olitorius
Cpa.g.sc66.28 Carica papaya
CsaV3_6G004710 Cucumis sativus L.
CSS0022814 Camellia sinensis var. sinensis
DCAR_001073 Daucus carota
DCAR_001074 Daucus carota
DCAR_011531 Daucus carota
Dinv15067 Davidia involucrata
Dinv41719 Davidia involucrata
Duzib177G0992 Durio zibethinus
ECA232G4191 Erigeron canadensis
EL10Ac1g00095 Beta vulgaris
Eucgr.F02589 Eucalyptus grandis
Eucgr.F02598 Eucalyptus grandis
FAN08G3056 Fragaria x ananassa
FAN13G1254 Fragaria x ananassa
FAN18G3373 Fragaria x ananassa
FvH4_5g31230 Fragaria vesca
Glyma.02G073200 Glycine max
Glyma.10G217800 Glycine max
Glyma.16G154600 Glycine max
Glyma.20G174300 Glycine max
Gohir.A13G121000 Gossypium hirsutum
Gohir.D13G125100 Gossypium hirsutum
Gorai.013G139900 Gossypium raimondii
GSVIVG01034778001 Vitis vinifera
HanXRQChr11g0325971 Helianthus annuus
Haze_08519 Corylus avellana
Haze_22512 Corylus avellana
Hma1.2p1_0162F.1_g072170 Hydrangea macrophylla
Hma1.2p1_2688F.1_g326980 Hydrangea macrophylla
HPP92_005689 Vanilla planifolia
HPP92_005698 Vanilla planifolia
HPP92_005699 Vanilla planifolia
Lalb_Chr02g0141721 Lupinus albus
Lj4A470G19 Lonicera japonica
Lj5g0012683 Lotus japonicus
Lsat_1_v5_gn_4_135220 Lactuca sativa
Manes.02G192900 Manihot esculenta
Mapoly0001s0410 Marchantia polymorpha
MBI03_g13095_MAGBIO Magnolia biondii
MBI16_g07687_MAGBIO Magnolia biondii
MCO02G019 Micromonas commoda
MCO08G029 Micromonas commoda
MCO17G086 Micromonas commoda
MD08G1220600 Malus domestica
MD10G1093700 Malus domestica
MD15G1411300 Malus domestica
Medtr1g096880 Medicago truncatula
MELO3C019942.2 Cucumis melo
Migut.C01280 Erythranthe guttata
Migut.N03360 Erythranthe guttata
MSTRG.1537 Avicennia marina
Nitab4.5_0000303g0240 Nicotiana tabacum
Nitab4.5_0001082g0120 Nicotiana tabacum
Nn5g27655 Nelumbo nucifera
Oeu021219.1 Olea europaea
Os04g0432300 Oryza sativa ssp. japonica
Os12g0170600 Oryza sativa ssp. japonica
Peaxi162Scf00268g00087 Petunia axillaris
PGR042G3638 Punica granatum
PGSC0003DMG400026071 Solanum tuberosum
Phvul.007G088300 Phaseolus vulgaris
Potri.013G111200 Populus trichocarpa
Potri.019G082200 Populus trichocarpa
Pp3c18_90 Physcomitrium patens
Prupe.1G557500 Prunus persica
Psat0s617g0080 Pisum sativum
Psat3g206080 Pisum sativum
Psat5g081360 Pisum sativum
Psat6g172400 Pisum sativum
PSO170G1049 Papaver somniferum
PSO782G4240 Papaver somniferum
QL02p033376 Quercus lobata
RcHm_v2.0_Chr7g0226481 Rosa chinensis
Rhsim06G0094900 Rhododendron simsii
Rhsim09G0039300 Rhododendron simsii
Sabra19G0093700 Salix brachista
SalBow6G0056 Salvia bowleyana
Sc01g0001840 Simmondsia chinensis
Sed0027152 Sechium edule
SEGI_18807 Sequoiadendron giganteum
SGA_v2.0_scaffold149G36576 Striga asiatica
SGA_v2.0_scaffold25G11063 Striga asiatica
SHI09024 Sapria himalayana
SMO137G0293 Selaginella moellendorffii
Solyc06g065240.3 Solanum lycopersicum
Sopen06g023730 Solanum pennellii
Sp5g27060 Schrenkiella parvula
TAR381G0209 Trochodendron aralioides
THA.LOC104809738 Tarenaya hassleriana
Thecc.08G185000 Theobroma cacao
Thhalv10018642m.g Eutrema salsugineum
Thhalv10027318m.g Eutrema salsugineum
TPR.G15721 Trifolium pratense
TWI32G0118 Tripterygium wilfordii
unitig_899.g14614 Utricularia gibba
vmacro21836 Vaccinium macrocarpon
VMungo0720G1820 Vigna mungo
Zm00001eb407990 Zea mays

User provided reference genes

Program Settings