Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13150 Brassica napus
A04p10160 Brassica napus
Aa31LG2G2390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis
Actinidia03265 Actinidia chinensis
Actinidia06794 Actinidia chinensis
Actinidia12444 Actinidia chinensis
Ah.04g159110 Amaranthus hybridus
Ah.06g195370 Amaranthus hybridus
AL2G20300 Arabidopsis lyrata
AL2G20340 Arabidopsis lyrata
Aqoxy5G04319 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea
AT1G65270 Arabidopsis thaliana
ATR0743G231 Amborella trichopoda
Atru.chr12.1725 Acer truncatum
AUR62006638 Chenopodium quinoa
BcaB04g17978 Brassica carinata
BcaB05g24100 Brassica carinata
BcaB06g27020 Brassica carinata
BcaC02g09515 Brassica carinata
BcaC03g14691 Brassica carinata
BolC2t08267H Brassica oleracea
BraA02t06369Z Brassica rapa
BraA04t16680Z Brassica rapa
C02p21270 Brassica napus
C04p43640 Brassica napus
CAN.G37.2 Capsicum annuum
CANSAT54G1960 Cannabis sativa
CARHR056920 Cardamine hirsuta
CARHR216460 Cardamine hirsuta
CARHR216470 Cardamine hirsuta
Carub.0002s1084 Capsella rubella
Ca_08003_v3 Cicer arietinum L.
CBR_g36458 Chara braunii
Cc09_g03910 Coffea canephora
CDE04G1735 Ceratophyllum demersum
CDE07G0365 Ceratophyllum demersum
Cfa006249 Carpinus fangiana
Ciclev10012322m.g Citrus clementina
CiPaw.07G082100 Carya illinoinensis
ClCG03G010290 Citrullus lanatus
ClCG03G010310 Citrullus lanatus
Cpa.g.sc123.39 Carica papaya
Cpa.g.sc123.40 Carica papaya
CsaV3_1G044270 Cucumis sativus L.
CSS0002276 Camellia sinensis var. sinensis
CSS0025324 Camellia sinensis var. sinensis
CSS0033529 Camellia sinensis var. sinensis
CSS0048270 Camellia sinensis var. sinensis
DCAR_030004 Daucus carota
Dinv15702 Davidia involucrata
Dinv29083 Davidia involucrata
Duzib235G1473 Durio zibethinus
ECA232G2695 Erigeron canadensis
EL10Ac4g10004 Beta vulgaris
Eucgr.H01411 Eucalyptus grandis
Eucgr.H01412 Eucalyptus grandis
FAN02G1732 Fragaria x ananassa
FAN05G2398 Fragaria x ananassa
FAN09G1835 Fragaria x ananassa
FAN14G0011 Fragaria x ananassa
FvH4_6g00240 Fragaria vesca
Glyma.09G248700 Glycine max
Glyma.18G244000 Glycine max
Gohir.A02G112711 Gossypium hirsutum
Gohir.D03G060604 Gossypium hirsutum
Gorai.002G056000 Gossypium raimondii
GSVIVG01019061001 Vitis vinifera
HanXRQChr04g0101081 Helianthus annuus
Haze_04584 Corylus avellana
Haze_04585 Corylus avellana
HPP92_023718 Vanilla planifolia
Hund07363 Selenicereus undatus
Lalb_Chr03g0038061 Lupinus albus
Lj1A579T43 Lonicera japonica
Lj1g0012134 Lotus japonicus
Lsat_1_v5_gn_0_14820 Lactuca sativa
Lsat_1_v5_gn_2_63981 Lactuca sativa
Manes.13G003500 Manihot esculenta
Mapoly0069s0067 Marchantia polymorpha
MBI07_g02892_MAGBIO Magnolia biondii
MCO14G575 Micromonas commoda
MD04G1246900 Malus domestica
MD12G1263300 Malus domestica
Medtr3g103380 Medicago truncatula
Medtr7g080350 Medicago truncatula
MELO3C010021.2 Cucumis melo
Migut.F01861 Erythranthe guttata
MSTRG.335 Avicennia marina
Nitab4.5_0000248g0060 Nicotiana tabacum
Nitab4.5_0003825g0070 Nicotiana tabacum
Nn7g37593 Nelumbo nucifera
Oeu034777.1 Olea europaea
Oeu040717.1 Olea europaea
Os11g0264600 Oryza sativa ssp. japonica
Peaxi162Scf01053g00210 Petunia axillaris
PGR031G0068 Punica granatum
Phvul.008G052600 Phaseolus vulgaris
Potri.019G055100 Populus trichocarpa
Pp3c3_22280 Physcomitrium patens
PRCOL_00005036 Prasinoderma coloniale
Prupe.6G363100 Prunus persica
Psat3g102080 Pisum sativum
PSO210G0333 Papaver somniferum
PSO832G0344 Papaver somniferum
QL01p048186 Quercus lobata
RcHm_v2.0_Chr3g0447611 Rosa chinensis
Sabra19G0064300 Salix brachista
SalBow6G2392 Salvia bowleyana
Sc16g0010480 Simmondsia chinensis
Sed0025282 Sechium edule
SEGI_32803 Sequoiadendron giganteum
SGA_v2.0_scaffold340G49308 Striga asiatica
SMO203G0033 Selaginella moellendorffii
SMO357G0021 Selaginella moellendorffii
Solyc04g047720.4 Solanum lycopersicum
Sopen04g017810 Solanum pennellii
Sp5g19940 Schrenkiella parvula
Sp7g05900 Schrenkiella parvula
TAR633G0414 Trochodendron aralioides
THA.LOC104805701 Tarenaya hassleriana
THA.LOC104823809 Tarenaya hassleriana
Thecc.05G189200 Theobroma cacao
Thhalv10004459m.g Eutrema salsugineum
Thhalv10018947m.g Eutrema salsugineum
TPR.G33911 Trifolium pratense
TWI18G0853 Tripterygium wilfordii
unitig_0.g385 Utricularia gibba
vmacro19569 Vaccinium macrocarpon
vmacro19570 Vaccinium macrocarpon
VMungo1383G2134 Vigna mungo
Zm00001eb168750 Zea mays

User provided reference genes

Program Settings