Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p30660 Brassica napus
Aa31LG8G5730 Aethionema arabicum
Actinidia00495 Actinidia chinensis
Actinidia12988 Actinidia chinensis
Ah.01g006150 Amaranthus hybridus
AL3G32280 Arabidopsis lyrata
Aqoxy6G00992 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.41BJXF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.64QJ3Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D5Y0EF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DDX2YA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FX1CEN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IG85PU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QWNC93 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T05FEK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V0VBM3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4KKVA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WWU0A6 Arachis hypogaea
AT3G18890 Arabidopsis thaliana
ATR0733G035 Amborella trichopoda
Atru.chr5.2923 Acer truncatum
AUR62011364 Chenopodium quinoa
AUR62016697 Chenopodium quinoa
BcaB06g25943 Brassica carinata
BolC5t33383H Brassica oleracea
BraA05t21908Z Brassica rapa
C05p46540 Brassica napus
C08p43260 Brassica napus
CAN.G1.48 Capsicum annuum
CANSAT80G1909 Cannabis sativa
CARHR094330 Cardamine hirsuta
Carub.0003s1872 Capsella rubella
Ca_20841_v3 Cicer arietinum L.
CBR_g23485 Chara braunii
Cc02_g17970 Coffea canephora
Ciclev10028081m.g Citrus clementina
CiPaw.06G138100 Carya illinoinensis
ClCG02G005360 Citrullus lanatus
COL.COLO4_32470 Corchorus olitorius
Cpa.g.sc62.103 Carica papaya
Cre06.g269050 Chlamydomonas reinhardtii
Cre07.g349700 Chlamydomonas reinhardtii
CsaV3_7G010200 Cucumis sativus L.
CSS0030803 Camellia sinensis var. sinensis
CSS0035207 Camellia sinensis var. sinensis
DCAR_022090 Daucus carota
Dinv23561 Davidia involucrata
Duzib132G1036 Durio zibethinus
ECA236G5032 Erigeron canadensis
EL10Ac9g21765 Beta vulgaris
Eucgr.G00478 Eucalyptus grandis
Eucgr.G01505 Eucalyptus grandis
FAN15G0249 Fragaria x ananassa
FAN20G1723 Fragaria x ananassa
FAN24G2550 Fragaria x ananassa
FAN27G0274 Fragaria x ananassa
FvH4_2g07870 Fragaria vesca
Glyma.11G121000 Glycine max
Glyma.11G121100 Glycine max
Glyma.12G046066 Glycine max
Glyma.12G046132 Glycine max
Glyma.12G046200 Glycine max
Gohir.A03G180301 Gossypium hirsutum
Gohir.D02G203047 Gossypium hirsutum
Gorai.005G229200 Gossypium raimondii
GSVIVG01031907001 Vitis vinifera
HanXRQChr16g0505051 Helianthus annuus
Haze_02424 Corylus avellana
Hma1.2p1_1353F.1_g277650 Hydrangea macrophylla
Hma1.2p1_2724F.1_g327480 Hydrangea macrophylla
Hma1.2p1_2724F.1_g327500 Hydrangea macrophylla
Hma1.2p1_2724F.1_g327510 Hydrangea macrophylla
Hund06147 Selenicereus undatus
Hund06152 Selenicereus undatus
Hund06216 Selenicereus undatus
Lalb_Chr03g0025851 Lupinus albus
Lj3g0001588 Lotus japonicus
Lj6g0019018 Lotus japonicus
Lsat_1_v5_gn_7_89860 Lactuca sativa
Manes.15G147600 Manihot esculenta
Mapoly0002s0130 Marchantia polymorpha
Mapoly0040s0084 Marchantia polymorpha
MBI16_g10972_MAGBIO Magnolia biondii
MD10G1083200 Malus domestica
Medtr4g068970 Medicago truncatula
MELO3C018409.2 Cucumis melo
Migut.B00273 Erythranthe guttata
MSTRG.5387 Avicennia marina
Nitab4.5_0001361g0190 Nicotiana tabacum
Nitab4.5_0012694g0010 Nicotiana tabacum
Nn5g29471 Nelumbo nucifera
Nn5g31359 Nelumbo nucifera
Os10g0100300 Oryza sativa ssp. japonica
Peaxi162Scf00003g01433 Petunia axillaris
PGR042G3650 Punica granatum
PGSC0003DMG400008269 Solanum tuberosum
Phvul.011G048000 Phaseolus vulgaris
Potri.004G150300 Populus trichocarpa
Potri.009G111323 Populus trichocarpa
Potri.T124404 Populus trichocarpa
Pp3c10_3330 Physcomitrium patens
Pp3c15_7750 Physcomitrium patens
PRCOL_00005081 Prasinoderma coloniale
PRCOL_00006217 Prasinoderma coloniale
Prupe.8G106300 Prunus persica
Psat6g044560 Pisum sativum
Psat7g185400 Pisum sativum
PSO541G4825 Papaver somniferum
PSO675G5886 Papaver somniferum
QL11p040109 Quercus lobata
RcHm_v2.0_Chr6g0262291 Rosa chinensis
Rhsim11G0172800 Rhododendron simsii
Sabra09G0085100 Salix brachista
SalBow6G0785 Salvia bowleyana
Sc14g0001770 Simmondsia chinensis
Sed0026918 Sechium edule
SEGI_40916 Sequoiadendron giganteum
SEGI_40956 Sequoiadendron giganteum
SGA_v2.0_scaffold4294G54464 Striga asiatica
SGA_v2.0_scaffold58G20578 Striga asiatica
SMO146G0207 Selaginella moellendorffii
Solyc10g051110.1 Solanum lycopersicum
Sopen10g022810 Solanum pennellii
Sp3g16990 Schrenkiella parvula
TAR628G1306 Trochodendron aralioides
THA.LOC104800353 Tarenaya hassleriana
Thecc.02G121200 Theobroma cacao
Thhalv10020309m.g Eutrema salsugineum
TPR.G1685 Trifolium pratense
TPR.G28051 Trifolium pratense
TWI79G0480 Tripterygium wilfordii
unitig_0.g71 Utricularia gibba
vmacro02148 Vaccinium macrocarpon
VMungo1127G1831 Vigna mungo
Zm00001eb118450 Zea mays

User provided reference genes

Program Settings