Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07130 Brassica napus
A03p60520 Brassica napus
A08p18910 Brassica napus
Aa31LG2G19280 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1743 Anthoceros agrestis
Actinidia02524 Actinidia chinensis
Actinidia02544 Actinidia chinensis
Actinidia07556 Actinidia chinensis
Ah.13g066690 Amaranthus hybridus
AL7G21030 Arabidopsis lyrata
Aqoxy7G02605 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.05JXYY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PZIB41 Arachis hypogaea
AT4G31040 Arabidopsis thaliana
ATR0626G413 Amborella trichopoda
Atru.chr7.1036 Acer truncatum
AUR62002224 Chenopodium quinoa
AUR62015437 Chenopodium quinoa
AUR62023055 Chenopodium quinoa
AUR62044085 Chenopodium quinoa
AUR62044089 Chenopodium quinoa
BcaC01g01117 Brassica carinata
BcaC09g51891 Brassica carinata
BcaNung02727 Brassica carinata
BcaNung03419 Brassica carinata
BolC1t00776H Brassica oleracea
BolC7t46295H Brassica oleracea
BraA01t00665Z Brassica rapa
BraA03t15091Z Brassica rapa
C01p07890 Brassica napus
C07p58400 Brassica napus
C07p58410 Brassica napus
CAN.G63.1 Capsicum annuum
CANSAT80G1379 Cannabis sativa
CARHR238950 Cardamine hirsuta
Carub.0007s0948 Capsella rubella
Ca_25640_v3 Cicer arietinum L.
CBR_g84827 Chara braunii
Cc06_g23670 Coffea canephora
CDE02G4601 Ceratophyllum demersum
CDE04G3649 Ceratophyllum demersum
Cfa012883 Carpinus fangiana
Cfa012886 Carpinus fangiana
Ciclev10033590m.g Citrus clementina
Ciclev10033693m.g Citrus clementina
CiPaw.08G000500 Carya illinoinensis
ClCG11G011190 Citrullus lanatus
Cpa.g.sc91.69 Carica papaya
Cre06.g260250 Chlamydomonas reinhardtii
CsaV3_2G009240 Cucumis sativus L.
CSS0047952 Camellia sinensis var. sinensis
DCAR_014583 Daucus carota
Duzib150G0032 Durio zibethinus
EL10Ac3g05861 Beta vulgaris
Eucgr.C02158 Eucalyptus grandis
FAN12G2371 Fragaria x ananassa
FAN17G0526 Fragaria x ananassa
FAN22G1527 Fragaria x ananassa
FvH4_4g00180 Fragaria vesca
Glyma.01G001100 Glycine max
Glyma.08G359700 Glycine max
Gohir.A05G000250 Gossypium hirsutum
Gohir.A05G000300 Gossypium hirsutum
Gohir.D05G000500 Gossypium hirsutum
Gorai.009G000300 Gossypium raimondii
GSVIVG01032240001 Vitis vinifera
HanXRQChr03g0067061 Helianthus annuus
Haze_21249 Corylus avellana
HPP92_020428 Vanilla planifolia
HPP92_020430 Vanilla planifolia
HPP92_020431 Vanilla planifolia
Hund04583 Selenicereus undatus
Lalb_Chr24g0401711 Lupinus albus
Lj2g0003070 Lotus japonicus
Lj5A796G22 Lonicera japonica
Lj5A796T24 Lonicera japonica
Lsat_1_v5_gn_7_57180 Lactuca sativa
Manes.05G205900 Manihot esculenta
Mapoly0066s0016 Marchantia polymorpha
MBI13_g33574_MAGBIO Magnolia biondii
MBI16_g00821_MAGBIO Magnolia biondii
MD04G1001800 Malus domestica
MD10G1290500 Malus domestica
Medtr6g093210 Medicago truncatula
MELO3C003909.2 Cucumis melo
Migut.J00857 Erythranthe guttata
MSTRG.19410 Avicennia marina
MSTRG.5969 Avicennia marina
Nitab4.5_0000170g0200 Nicotiana tabacum
Nitab4.5_0000807g0130 Nicotiana tabacum
Nn8g41244 Nelumbo nucifera
Oeu021242.1 Olea europaea
Os08g0224300 Oryza sativa ssp. japonica
Peaxi162Scf00474g00214 Petunia axillaris
Peaxi162Scf00474g00221 Petunia axillaris
PGR142G1608 Punica granatum
Phvul.L001608 Phaseolus vulgaris
Potri.006G080100 Populus trichocarpa
Potri.018G150000 Populus trichocarpa
Pp3c10_12270 Physcomitrium patens
Pp3c4_7870 Physcomitrium patens
PRCOL_00003075 Prasinoderma coloniale
Prupe.1G002100 Prunus persica
Psat1g051920 Pisum sativum
PSO063G1085 Papaver somniferum
PSO170G1242 Papaver somniferum
QL11p006989 Quercus lobata
QL11p007002 Quercus lobata
RcHm_v2.0_Chr4g0384781 Rosa chinensis
Rhsim01G0103700 Rhododendron simsii
RhsimUnG0238700 Rhododendron simsii
Sabra06G0060600 Salix brachista
Sc09g0007530 Simmondsia chinensis
Sed0017765 Sechium edule
SEGI_19916 Sequoiadendron giganteum
SGA_v2.0_scaffold318G48485 Striga asiatica
Solyc07g042800.2 Solanum lycopersicum
Solyc07g042810.3 Solanum lycopersicum
Solyc07g042820.3 Solanum lycopersicum
Sopen07g022440 Solanum pennellii
Sp7g28920 Schrenkiella parvula
TAR383G0506 Trochodendron aralioides
THA.LOC104803572 Tarenaya hassleriana
THA.LOC104804495 Tarenaya hassleriana
Thecc.09G201300 Theobroma cacao
Thhalv10025215m.g Eutrema salsugineum
TPR.G21340 Trifolium pratense
TWI32G0667 Tripterygium wilfordii
vmacro20737 Vaccinium macrocarpon
VMungo0464G0621 Vigna mungo
VMungo1215G1395 Vigna mungo
Zm00001eb000720 Zea mays
Zm00001eb000750 Zea mays
Zm00001eb404230 Zea mays
Zm00001eb404240 Zea mays

User provided reference genes

Program Settings