Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p08090 Brassica napus
A09p11320 Brassica napus
Aa31LG11G12650 Aethionema arabicum
Actinidia11611 Actinidia chinensis
Ah.04g154640 Amaranthus hybridus
AL6G27950 Arabidopsis lyrata
Aqoxy5G00270 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EVJW84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V38LZ0 Arachis hypogaea
AT5G16950 Arabidopsis thaliana
ATR0626G090 Amborella trichopoda
Atru.chr1.3777 Acer truncatum
Atru.chr1.3778 Acer truncatum
Atru.chr5.698 Acer truncatum
BcaB01g04964 Brassica carinata
BcaB01g05235 Brassica carinata
BcaB01g05237 Brassica carinata
BcaB07g31735 Brassica carinata
BcaC04g22979 Brassica carinata
BolC3t13430H Brassica oleracea
BolC9t54226H Brassica oleracea
BraA03t10134Z Brassica rapa
BraA09t36770Z Brassica rapa
C03p09360 Brassica napus
C09p13330 Brassica napus
CANSAT54G0055 Cannabis sativa
CARHR196210 Cardamine hirsuta
Carub.0003s3142 Capsella rubella
Carub.0006s1516 Capsella rubella
Ca_21653_v3 Cicer arietinum L.
CBR_g25869 Chara braunii
Cc05_g05310 Coffea canephora
CDE02G0151 Ceratophyllum demersum
Cfa011814 Carpinus fangiana
Cfa015971 Carpinus fangiana
Ciclev10023034m.g Citrus clementina
CiPaw.06G025900 Carya illinoinensis
ClCG05G000700 Citrullus lanatus
COL.COLO4_20773 Corchorus olitorius
COL.COLO4_22630 Corchorus olitorius
COL.COLO4_33816 Corchorus olitorius
Cpa.g.c32851 Carica papaya
CsaV3_3G007920 Cucumis sativus L.
CSS0000543 Camellia sinensis var. sinensis
CSS0033648 Camellia sinensis var. sinensis
DCAR_003312 Daucus carota
DCAR_022248 Daucus carota
Dinv12261 Davidia involucrata
Dinv36923 Davidia involucrata
Duzib138G0305 Durio zibethinus
ECA247G2075 Erigeron canadensis
EL10Ac7g17336 Beta vulgaris
Eucgr.D02385 Eucalyptus grandis
FAN09G0731 Fragaria x ananassa
Glyma.05G129800 Glycine max
Glyma.08G084500 Glycine max
Gohir.A05G276166 Gossypium hirsutum
Gohir.A07G202100 Gossypium hirsutum
Gohir.A08G193000 Gossypium hirsutum
Gohir.D05G278050 Gossypium hirsutum
Gohir.D07G208300 Gossypium hirsutum
Gohir.D08G211000 Gossypium hirsutum
Gorai.001G235000 Gossypium raimondii
Gorai.004G223700 Gossypium raimondii
Gorai.009G291400 Gossypium raimondii
HanXRQChr08g0228461 Helianthus annuus
Haze_00504 Corylus avellana
Haze_00507 Corylus avellana
Haze_11591 Corylus avellana
Hma1.2p1_0841F.1_g227020 Hydrangea macrophylla
Hund27185 Selenicereus undatus
Lalb_Chr07g0188641 Lupinus albus
Lalb_Chr13g0300501 Lupinus albus
Lj3g0001466 Lotus japonicus
Lj4g0019743 Lotus japonicus
Lj4g0026259 Lotus japonicus
Lsat_1_v5_gn_9_14361 Lactuca sativa
Manes.01G244300 Manihot esculenta
Manes.02G161400 Manihot esculenta
Mapoly0010s0158 Marchantia polymorpha
MBI09_g43998_MAGBIO Magnolia biondii
MD04G1200700 Malus domestica
MD12G1213200 Malus domestica
Medtr4g115740 Medicago truncatula
Medtr5g009535 Medicago truncatula
MELO3C006010.2 Cucumis melo
Migut.H01206 Erythranthe guttata
Nitab4.5_0001134g0180 Nicotiana tabacum
Nitab4.5_0003429g0070 Nicotiana tabacum
Nitab4.5_0008807g0010 Nicotiana tabacum
Nn6g33491 Nelumbo nucifera
Nn8g40131 Nelumbo nucifera
Oeu034339.1 Olea europaea
Oeu052918.1 Olea europaea
Os01g0258600 Oryza sativa ssp. japonica
Os06g0184100 Oryza sativa ssp. japonica
Peaxi162Scf00007g01414 Petunia axillaris
PGR031G1812 Punica granatum
PGSC0003DMG400026192 Solanum tuberosum
Phvul.002G194100 Phaseolus vulgaris
Potri.001G082000 Populus trichocarpa
Pp3c9_710 Physcomitrium patens
Prupe.6G320800 Prunus persica
Psat4g033600 Pisum sativum
QL04p074672 Quercus lobata
RcHm_v2.0_Chr1g0322091 Rosa chinensis
RcHm_v2.0_Chr1g0326231 Rosa chinensis
RcHm_v2.0_Chr3g0455721 Rosa chinensis
Rhsim06G0009100 Rhododendron simsii
Rhsim06G0009300 Rhododendron simsii
Rhsim13G0061400 Rhododendron simsii
Sabra01G0058900 Salix brachista
SalBow1G0213 Salvia bowleyana
SalBow1G0716 Salvia bowleyana
Sc01g0002510 Simmondsia chinensis
Sed0023332 Sechium edule
Sed0027756 Sechium edule
SGA_v2.0_scaffold57G20299 Striga asiatica
Solyc07g052913.1 Solanum lycopersicum
Sopen07g026470 Solanum pennellii
Sp6g27160 Schrenkiella parvula
THA.LOC104825391 Tarenaya hassleriana
THA.LOC104825885 Tarenaya hassleriana
Thecc.01G232600 Theobroma cacao
Thhalv10015111m.g Eutrema salsugineum
Thhalv10022933m.g Eutrema salsugineum
TPR.G40143 Trifolium pratense
TWI38G0894 Tripterygium wilfordii
TWI63G1301 Tripterygium wilfordii
unitig_0.g2200 Utricularia gibba
vmacro02893 Vaccinium macrocarpon
vmacro12515 Vaccinium macrocarpon
VMungo0251G3003 Vigna mungo
Zm00001eb109340 Zea mays
Zm00001eb374690 Zea mays

User provided reference genes

Program Settings