Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p43540 Brassica napus
Aa31LG2G7550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1363 Anthoceros agrestis
Actinidia08214 Actinidia chinensis
Actinidia19857 Actinidia chinensis
AL5G11900 Arabidopsis lyrata
Aqoxy3G00779 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6QLS7G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KX1I2A Arachis hypogaea
AT2G02710 Arabidopsis thaliana
ATR1120G176 Amborella trichopoda
Atru.chr11.1855 Acer truncatum
AUR62026256 Chenopodium quinoa
AUR62026449 Chenopodium quinoa
BcaC06g31222 Brassica carinata
BcaC06g34047 Brassica carinata
BolC7t43842H Brassica oleracea
BraA06t27239Z Brassica rapa
C07p33320 Brassica napus
CAN.G27.69 Capsicum annuum
CAN.G279.4 Capsicum annuum
CAN.G292.13 Capsicum annuum
CAN.G827.5 Capsicum annuum
CARHR145140 Cardamine hirsuta
Carub.0005s0162 Capsella rubella
Ca_04740_v3 Cicer arietinum L.
CBR_g44329 Chara braunii
CBR_g44331 Chara braunii
Cc11_g13500 Coffea canephora
CDE06G1641 Ceratophyllum demersum
Cfa009038 Carpinus fangiana
Ciclev10031752m.g Citrus clementina
CiPaw.06G080500 Carya illinoinensis
COL.COLO4_07922 Corchorus olitorius
Cpa.g.sc5.278 Carica papaya
CsaV3_5G032360 Cucumis sativus L.
CSS0017461 Camellia sinensis var. sinensis
DCAR_027379 Daucus carota
DCAR_027381 Daucus carota
Dinv24953 Davidia involucrata
Dinv34200 Davidia involucrata
Duzib251G0167 Durio zibethinus
ECA233G0120 Erigeron canadensis
EL10Ac6g13146 Beta vulgaris
Eucgr.G02552 Eucalyptus grandis
FAN07G0318 Fragaria x ananassa
FAN12G0925 Fragaria x ananassa
FAN17G2159 Fragaria x ananassa
FAN18G2728 Fragaria x ananassa
FAN22G1520 Fragaria x ananassa
FvH4_4g31970 Fragaria vesca
FvH4_5g36250 Fragaria vesca
Glyma.01G042300 Glycine max
Glyma.02G022000 Glycine max
Glyma.05G102700 Glycine max
Glyma.16G086401 Glycine max
Gohir.A03G098200 Gossypium hirsutum
Gohir.A03G098866 Gossypium hirsutum
Gohir.D02G114900 Gossypium hirsutum
Gorai.005G139000 Gossypium raimondii
GSVIVG01020075001 Vitis vinifera
HanXRQChr03g0062911 Helianthus annuus
HanXRQChr06g0181101 Helianthus annuus
HanXRQChr12g0369791 Helianthus annuus
Haze_12067 Corylus avellana
Haze_27184 Corylus avellana
Hma1.2p1_1045F.1_g251520 Hydrangea macrophylla
Hund05914 Selenicereus undatus
Lalb_Chr04g0256331 Lupinus albus
Lj2g0023025 Lotus japonicus
Lj6A794T100 Lonicera japonica
Lsat_1_v5_gn_8_54041 Lactuca sativa
Manes.01G190501 Manihot esculenta
Manes.01G191150 Manihot esculenta
Manes.05G096400 Manihot esculenta
Mapoly0022s0166 Marchantia polymorpha
MBI05_g17476_MAGBIO Magnolia biondii
MD13G1079100 Malus domestica
MD16G1078900 Malus domestica
Medtr5g038420 Medicago truncatula
MELO3C012066.2 Cucumis melo
Migut.L01345 Erythranthe guttata
MSTRG.670 Avicennia marina
MSTRG.7827 Avicennia marina
Nitab4.5_0000679g0040 Nicotiana tabacum
Nitab4.5_0002291g0030 Nicotiana tabacum
Nitab4.5_0002382g0030 Nicotiana tabacum
Nitab4.5_0008717g0020 Nicotiana tabacum
Nn3g17125 Nelumbo nucifera
Nn4g23040 Nelumbo nucifera
Oeu001591.1 Olea europaea
Oeu057183.1 Olea europaea
Os01g0186200 Oryza sativa ssp. japonica
Peaxi162Scf00026g00226 Petunia axillaris
Peaxi162Scf00209g00328 Petunia axillaris
PGR119G2093 Punica granatum
PGSC0003DMG400017642 Solanum tuberosum
PGSC0003DMG400026779 Solanum tuberosum
Phvul.002G066800 Phaseolus vulgaris
Potri.008G180700 Populus trichocarpa
Potri.010G053500 Populus trichocarpa
Pp3c15_8610 Physcomitrium patens
Pp3c9_5440 Physcomitrium patens
Prupe.1G267700 Prunus persica
Psat2g124360 Pisum sativum
PSO017G2269 Papaver somniferum
QL03p065700 Quercus lobata
RcHm_v2.0_Chr4g0440651 Rosa chinensis
Rhsim12G0057300 Rhododendron simsii
Sabra08G0137900 Salix brachista
Sabra10G0017100 Salix brachista
SalBow2G1620 Salvia bowleyana
SalBow2G2320 Salvia bowleyana
Sc14g0008390 Simmondsia chinensis
Sed0006215 Sechium edule
Sed0006614 Sechium edule
SEGI_01041 Sequoiadendron giganteum
SGA_v2.0_scaffold266G46130 Striga asiatica
SMO172G0106 Selaginella moellendorffii
Solyc01g010480.3 Solanum lycopersicum
Solyc05g007020.4 Solanum lycopersicum
Sopen01g006090 Solanum pennellii
Sopen05g002980 Solanum pennellii
Sp2g13820 Schrenkiella parvula
TAR374G1408 Trochodendron aralioides
TAR622G1412 Trochodendron aralioides
THA.LOC104801783 Tarenaya hassleriana
Thecc.02G355400 Theobroma cacao
Thhalv10004326m.g Eutrema salsugineum
TPR.G13765 Trifolium pratense
TPR.G8944 Trifolium pratense
TWI18G0628 Tripterygium wilfordii
vmacro01227 Vaccinium macrocarpon
VMungo1215G1118 Vigna mungo
Zm00001eb121590 Zea mays

User provided reference genes

Program Settings