Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p28290 Brassica napus
Aa31LG9G11230 Aethionema arabicum
Aa31LG9G11240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis
Actinidia22740 Actinidia chinensis
Actinidia27306 Actinidia chinensis
Ah.12g052840 Amaranthus hybridus
AL6G44960 Arabidopsis lyrata
Aqoxy5G04312 Aquilegia oxysepala
Aqoxy5G04313 Aquilegia oxysepala
AT4G10890 Arabidopsis thaliana
ATR0602G092 Amborella trichopoda
ATR0602G162 Amborella trichopoda
Atru.chr9.1942 Acer truncatum
AUR62007011 Chenopodium quinoa
AUR62019875 Chenopodium quinoa
BcaB01g01556 Brassica carinata
BcaC04g21086 Brassica carinata
BolC9t56419H Brassica oleracea
BraA09t38398Z Brassica rapa
C09p35860 Brassica napus
CAN.G567.32 Capsicum annuum
CANSAT21G0853 Cannabis sativa
CARHR255720 Cardamine hirsuta
CARHR255730 Cardamine hirsuta
Carub.0006s2962 Capsella rubella
Ca_17460_v3 Cicer arietinum L.
Cc08_g16390 Coffea canephora
Cfa011969 Carpinus fangiana
Ciclev10023874m.g Citrus clementina
Ciclev10023944m.g Citrus clementina
CiPaw.11G117200 Carya illinoinensis
Cpa.g.sc79.3 Carica papaya
CsaV3_5G001940 Cucumis sativus L.
CSS0003604 Camellia sinensis var. sinensis
DCAR_006511 Daucus carota
Dinv37498 Davidia involucrata
Duzib116G0305 Durio zibethinus
ECA240G0322 Erigeron canadensis
EL10Ac5g12951 Beta vulgaris
Eucgr.E00686 Eucalyptus grandis
Eucgr.E00696 Eucalyptus grandis
Eucgr.E00704 Eucalyptus grandis
Eucgr.E00710 Eucalyptus grandis
Eucgr.E00726 Eucalyptus grandis
Eucgr.E00744 Eucalyptus grandis
Eucgr.E00747 Eucalyptus grandis
Eucgr.E00749 Eucalyptus grandis
Eucgr.E00752 Eucalyptus grandis
Eucgr.E00762 Eucalyptus grandis
Eucgr.E00894 Eucalyptus grandis
Eucgr.E00895 Eucalyptus grandis
Eucgr.E00900 Eucalyptus grandis
Eucgr.E00912 Eucalyptus grandis
Eucgr.E00939 Eucalyptus grandis
Eucgr.E00945 Eucalyptus grandis
Eucgr.E00956 Eucalyptus grandis
Eucgr.E00969 Eucalyptus grandis
Eucgr.E00971 Eucalyptus grandis
Eucgr.E01013 Eucalyptus grandis
Eucgr.H03743 Eucalyptus grandis
Eucgr.H03760 Eucalyptus grandis
FAN04G0565 Fragaria x ananassa
FAN04G0792 Fragaria x ananassa
FAN08G0729 Fragaria x ananassa
FAN13G2465 Fragaria x ananassa
FAN18G0036 Fragaria x ananassa
FAN18G2480 Fragaria x ananassa
FAN18G2579 Fragaria x ananassa
FAN18G3583 Fragaria x ananassa
FvH4_5g11630 Fragaria vesca
Glyma.05G218900 Glycine max
Glyma.08G025000 Glycine max
Gohir.A02G088000 Gossypium hirsutum
Gohir.D02G103200 Gossypium hirsutum
Gorai.005G117300 Gossypium raimondii
GSVIVG01019596001 Vitis vinifera
GSVIVG01019597001 Vitis vinifera
HanXRQChr03g0083721 Helianthus annuus
HanXRQChr03g0083731 Helianthus annuus
Haze_09107 Corylus avellana
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla
HPP92_024143 Vanilla planifolia
Hund14203 Selenicereus undatus
Lalb_Chr05g0223951 Lupinus albus
Lalb_Chr05g0223961 Lupinus albus
Lj4g0026879 Lotus japonicus
Lj8C204T6 Lonicera japonica
Lsat_1_v5_gn_3_40061 Lactuca sativa
Lsat_1_v5_gn_5_82800 Lactuca sativa
Lsat_1_v5_gn_6_83361 Lactuca sativa
Lsat_1_v5_gn_8_138920 Lactuca sativa
Lsat_1_v5_gn_9_112141 Lactuca sativa
Manes.01G049500 Manihot esculenta
MBI07_g24771_MAGBIO Magnolia biondii
MD06G1111700 Malus domestica
Medtr8g099725 Medicago truncatula
MELO3C033830.2 Cucumis melo
Migut.E00735 Erythranthe guttata
Migut.E01650 Erythranthe guttata
Migut.E01651 Erythranthe guttata
Nitab4.5_0002367g0090 Nicotiana tabacum
Nitab4.5_0002793g0030 Nicotiana tabacum
Nn1g00296 Nelumbo nucifera
Oeu055021.1 Olea europaea
Os09g0363400 Oryza sativa ssp. japonica
Peaxi162Scf00074g00526 Petunia axillaris
PGR042G2859 Punica granatum
PGSC0003DMG400012134 Solanum tuberosum
Phvul.002G300700 Phaseolus vulgaris
Potri.007G058050 Populus trichocarpa
Prupe.5G124500 Prunus persica
Psat7g024000 Pisum sativum
PSO063G3570 Papaver somniferum
PSO063G6181 Papaver somniferum
PSO170G4328 Papaver somniferum
QL02p029612 Quercus lobata
RcHm_v2.0_Chr7g0186161 Rosa chinensis
Rhsim07G0080700 Rhododendron simsii
Sabra07G0049700 Salix brachista
Sc01g0010430 Simmondsia chinensis
Sed0007946 Sechium edule
SGA_v2.0_scaffold74G24601 Striga asiatica
SHI06955 Sapria himalayana
Solyc08g082720.4 Solanum lycopersicum
Sopen08g030950 Solanum pennellii
Sp6g06640 Schrenkiella parvula
TAR629G1222 Trochodendron aralioides
THA.LOC104813047 Tarenaya hassleriana
Thecc.08G166000 Theobroma cacao
Thhalv10028849m.g Eutrema salsugineum
TPR.G3378 Trifolium pratense
TPR.G3392 Trifolium pratense
TWI60G0567 Tripterygium wilfordii
vmacro13879 Vaccinium macrocarpon

User provided reference genes

Program Settings