Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p04910 Brassica napus
Aa31LG10G5470 Aethionema arabicum
Actinidia01071 Actinidia chinensis
Actinidia18514 Actinidia chinensis
Ah.07g203560 Amaranthus hybridus
AL1G54900 Arabidopsis lyrata
Aqoxy1G04021 Aquilegia oxysepala
Aqoxy2G02493 Aquilegia oxysepala
Aqoxy2G02494 Aquilegia oxysepala
Aqoxy7G02275 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ASXI8Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4J88K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea
AT1G48300 Arabidopsis thaliana
ATR0796G282 Amborella trichopoda
Atru.chr4.3177 Acer truncatum
Atru.chr5.865 Acer truncatum
AUR62002540 Chenopodium quinoa
AUR62023652 Chenopodium quinoa
BcaB04g17451 Brassica carinata
BcaB05g23126 Brassica carinata
BcaB08g34443 Brassica carinata
BcaC01g00240 Brassica carinata
BcaC07g37153 Brassica carinata
BolC3t19970H Brassica oleracea
BolC8t47338H Brassica oleracea
BraA08t32517Z Brassica rapa
C08p05240 Brassica napus
CAN.G162.97 Capsicum annuum
CAN.G484.97 Capsicum annuum
CANSAT78G1256 Cannabis sativa
CARHR037910 Cardamine hirsuta
CARHR041400 Cardamine hirsuta
Carub.0001s3743 Capsella rubella
Ca_21368_v3 Cicer arietinum L.
Cc03_g00040 Coffea canephora
CDE02G3050 Ceratophyllum demersum
CDE09G0152 Ceratophyllum demersum
CDE09G0185 Ceratophyllum demersum
Cfa015740 Carpinus fangiana
Ciclev10005574m.g Citrus clementina
Ciclev10020833m.g Citrus clementina
CiPaw.01G128000 Carya illinoinensis
ClCG05G006890 Citrullus lanatus
COL.COLO4_23133 Corchorus olitorius
Cpa.g.sc146.13 Carica papaya
Cpa.g.sc57.12 Carica papaya
CsaV3_3G015560 Cucumis sativus L.
CSS0030034 Camellia sinensis var. sinensis
Dinv24720 Davidia involucrata
Duzib133G1161 Durio zibethinus
Duzib138G1928 Durio zibethinus
ECA246G2714 Erigeron canadensis
EL10Ac3g06235 Beta vulgaris
Eucgr.H04131 Eucalyptus grandis
FAN07G0153 Fragaria x ananassa
FAN07G1029 Fragaria x ananassa
FAN12G0946 Fragaria x ananassa
FAN17G1594 Fragaria x ananassa
FvH4_4g21650 Fragaria vesca
FvH4_4g21660 Fragaria vesca
Glyma.13G118300 Glycine max
Glyma.17G041600 Glycine max
Gohir.A11G104400 Gossypium hirsutum
Gohir.D11G109200 Gossypium hirsutum
Gorai.007G116800 Gossypium raimondii
GSVIVG01017699001 Vitis vinifera
HanXRQChr05g0148961 Helianthus annuus
Haze_00756 Corylus avellana
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla
HPP92_012765 Vanilla planifolia
Hund12260 Selenicereus undatus
Lalb_Chr13g0299011 Lupinus albus
Lj4g0014107 Lotus japonicus
Lsat_1_v5_gn_6_118320 Lactuca sativa
Manes.01G234700 Manihot esculenta
Manes.03G212700 Manihot esculenta
Mapoly0035s0141 Marchantia polymorpha
MBI19_g30285_MAGBIO Magnolia biondii
MD13G1156700 Malus domestica
MD16G1134300 Malus domestica
Medtr4g124080 Medicago truncatula
MELO3C006755.2 Cucumis melo
Migut.H01460 Erythranthe guttata
MSTRG.13210 Avicennia marina
MSTRG.14719 Avicennia marina
Nitab4.5_0000978g0060 Nicotiana tabacum
Nitab4.5_0012375g0020 Nicotiana tabacum
Nn3g21941 Nelumbo nucifera
Nn3g21943 Nelumbo nucifera
Nn4g25353 Nelumbo nucifera
Oeu012285.1 Olea europaea
Os05g0137300 Oryza sativa ssp. japonica
Peaxi162Scf00323g00817 Petunia axillaris
PGR004G1534 Punica granatum
PGSC0003DMG400004596 Solanum tuberosum
Phvul.003G123000 Phaseolus vulgaris
Potri.002G187300 Populus trichocarpa
Potri.010G003200 Populus trichocarpa
Prupe.1G103600 Prunus persica
Psat0s1206g0160 Pisum sativum
PSO210G3229 Papaver somniferum
QL06p014502 Quercus lobata
RcHm_v2.0_Chr4g0427881 Rosa chinensis
Rhsim04G0249100 Rhododendron simsii
Sabra10G0002700 Salix brachista
SalBow7G0248 Salvia bowleyana
SalBow7G4520 Salvia bowleyana
Sc25g0002150 Simmondsia chinensis
Sed0002380 Sechium edule
Sed0009476 Sechium edule
SEGI_24223 Sequoiadendron giganteum
SEGI_24387 Sequoiadendron giganteum
SEGI_38196 Sequoiadendron giganteum
SGA_v2.0_scaffold109G31080 Striga asiatica
SMO356G0556 Selaginella moellendorffii
Solyc12g098850.2 Solanum lycopersicum
Sopen12g033600 Solanum pennellii
Sp1g35250 Schrenkiella parvula
TAR624G0439 Trochodendron aralioides
TAR625G0572 Trochodendron aralioides
TAR633G1051 Trochodendron aralioides
THA.LOC104802618 Tarenaya hassleriana
Thecc.01G324900 Theobroma cacao
Thhalv10011577m.g Eutrema salsugineum
TPR.G12556 Trifolium pratense
TWI53G0973 Tripterygium wilfordii
unitig_26.g9353 Utricularia gibba
VMungo1215G1523 Vigna mungo
Zm00001eb417470 Zea mays

User provided reference genes

Program Settings