Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p24640 Brassica napus
Aa31LG2G13250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis
Actinidia10872 Actinidia chinensis
Actinidia31481 Actinidia chinensis
Ah.07g199650 Amaranthus hybridus
AL1G47010 Arabidopsis lyrata
Aqoxy3G02583 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.20MSI3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea
AT1G32730 Arabidopsis thaliana
ATR0829G207 Amborella trichopoda
Atru.chr9.1139 Acer truncatum
AUR62007206 Chenopodium quinoa
AUR62018795 Chenopodium quinoa
BcaC05g27301 Brassica carinata
BcaC05g27831 Brassica carinata
BolC5t31952H Brassica oleracea
BolC5t32561H Brassica oleracea
BraA05t21350Z Brassica rapa
C05p32200 Brassica napus
C05p38290 Brassica napus
CANSAT21G2176 Cannabis sativa
CARHR032110 Cardamine hirsuta
Carub.0001s3106 Capsella rubella
Ca_22032_v3 Cicer arietinum L.
CBR_g20170 Chara braunii
Cc08_g01580 Coffea canephora
CDE02G0742 Ceratophyllum demersum
CDE11G1022 Ceratophyllum demersum
Cfa012362 Carpinus fangiana
Ciclev10020716m.g Citrus clementina
CiPaw.11G085900 Carya illinoinensis
CiPaw.12G058800 Carya illinoinensis
ClCG10G001970 Citrullus lanatus
COL.COLO4_05118 Corchorus olitorius
Cpa.g.sc2.370 Carica papaya
Cpa.g.sc2.371 Carica papaya
CsaV3_3G002100 Cucumis sativus L.
CSS0003087 Camellia sinensis var. sinensis
DCAR_000726 Daucus carota
DCAR_000727 Daucus carota
DCAR_000728 Daucus carota
Dinv25170 Davidia involucrata
Duzib106G1532 Durio zibethinus
ECA233G5206 Erigeron canadensis
EL10Ac5g12212 Beta vulgaris
Eucgr.D02148 Eucalyptus grandis
FAN04G1778 Fragaria x ananassa
FAN08G3334 Fragaria x ananassa
FAN13G3323 Fragaria x ananassa
FAN18G3681 Fragaria x ananassa
FvH4_5g20870 Fragaria vesca
Glyma.05G068200 Glycine max
Glyma.17G150800 Glycine max
Gohir.A05G281200 Gossypium hirsutum
Gohir.A10G183200 Gossypium hirsutum
Gohir.D05G283033 Gossypium hirsutum
Gohir.D10G190000 Gossypium hirsutum
Gorai.009G296800 Gossypium raimondii
Gorai.011G213100 Gossypium raimondii
GSVIVG01013265001 Vitis vinifera
HanXRQChr12g0368601 Helianthus annuus
Haze_08321 Corylus avellana
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla
HPP92_007338 Vanilla planifolia
Hund11296 Selenicereus undatus
Lalb_Chr05g0220751 Lupinus albus
Lalb_Chr16g0386311 Lupinus albus
Lj2g0023107 Lotus japonicus
Lj4g0020972 Lotus japonicus
Lsat_1_v5_gn_6_67960 Lactuca sativa
Manes.15G171600 Manihot esculenta
Mapoly0082s0082 Marchantia polymorpha
MD06G1043400 Malus domestica
MD16G1267400 Malus domestica
Medtr4g099070 Medicago truncatula
MELO3C013882.2 Cucumis melo
Migut.E00807 Erythranthe guttata
Migut.E00856 Erythranthe guttata
MSTRG.1962 Avicennia marina
Nitab4.5_0001444g0090 Nicotiana tabacum
Nitab4.5_0001708g0070 Nicotiana tabacum
Nn1g00689 Nelumbo nucifera
Nn6g33714 Nelumbo nucifera
Oeu006260.1 Olea europaea
Oeu039353.1 Olea europaea
Oeu039354.1 Olea europaea
Os08g0129500 Oryza sativa ssp. japonica
Peaxi162Scf00084g00314 Petunia axillaris
PGR031G0896 Punica granatum
Phvul.003G227100 Phaseolus vulgaris
Potri.001G148500 Populus trichocarpa
Potri.003G085901 Populus trichocarpa
Pp3c2_10410 Physcomitrium patens
Prupe.5G050200 Prunus persica
Psat4g077240 Pisum sativum
Psat4g077280 Pisum sativum
PSO063G1478 Papaver somniferum
PSO782G3090 Papaver somniferum
QL12p007731 Quercus lobata
RcHm_v2.0_Chr7g0207891 Rosa chinensis
Rhsim07G0120600 Rhododendron simsii
Sabra01G0116900 Salix brachista
Sabra01G0118300 Salix brachista
Sabra01G0118400 Salix brachista
Sabra03G0055800 Salix brachista
Sc01g0007800 Simmondsia chinensis
Sed0018056 Sechium edule
SEGI_22059 Sequoiadendron giganteum
SEGI_34267 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09242 Striga asiatica
SMO347G0210 Selaginella moellendorffii
Solyc08g077450.4 Solanum lycopersicum
Sopen08g026040 Solanum pennellii
Sp1g28240 Schrenkiella parvula
TAR629G1255 Trochodendron aralioides
TAR636G0006 Trochodendron aralioides
THA.LOC104807943 Tarenaya hassleriana
THA.LOC104812740 Tarenaya hassleriana
Thecc.10G165100 Theobroma cacao
Thhalv10008194m.g Eutrema salsugineum
TPR.G11182 Trifolium pratense
TPR.G12459 Trifolium pratense
TWI60G1113 Tripterygium wilfordii
TWI81G0410 Tripterygium wilfordii
unitig_21.g20376 Utricularia gibba
vmacro14111 Vaccinium macrocarpon
vmacro14112 Vaccinium macrocarpon
VMungo0251G1933 Vigna mungo
VMungo0251G2395 Vigna mungo
Zm00001eb173270 Zea mays
Zm00001eb261700 Zea mays

User provided reference genes

Program Settings