Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01900 Brassica napus
A06p00090 Brassica napus
Aa31LG10G580 Aethionema arabicum
Aa31LG2G1100 Aethionema arabicum
Actinidia32859 Actinidia chinensis
Actinidia34114 Actinidia chinensis
Ah.02g115560 Amaranthus hybridus
AL1G63710 Arabidopsis lyrata
AL5G42240 Arabidopsis lyrata
Aqoxy2G04147 Aquilegia oxysepala
Aqoxy2G04148 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FD0XM2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N888CD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WS47X7 Arachis hypogaea
AT1G55630 Arabidopsis thaliana
AT3G60050 Arabidopsis thaliana
ATR0594G060 Amborella trichopoda
Atru.chr1.457 Acer truncatum
AUR62021190 Chenopodium quinoa
BcaB02g08196 Brassica carinata
BcaB07g33196 Brassica carinata
BcaC02g10107 Brassica carinata
BcaC08g43641 Brassica carinata
BolC4t24834H Brassica oleracea
BolC6t36140H Brassica oleracea
BraA04t15913Z Brassica rapa
BraA06t23224Z Brassica rapa
C04p32660 Brassica napus
C06p10600 Brassica napus
CAN.G134.133 Capsicum annuum
CANSAT21G1021 Cannabis sativa
CARHR045330 Cardamine hirsuta
CARHR170360 Cardamine hirsuta
Carub.0001s4415 Capsella rubella
Carub.0005s2679 Capsella rubella
Ca_08604_v3 Cicer arietinum L.
Ca_10769_v3 Cicer arietinum L.
Cc04_g11130 Coffea canephora
CDE02G0404 Ceratophyllum demersum
Cfa021839 Carpinus fangiana
Ciclev10004849m.g Citrus clementina
CiPaw.03G106500 Carya illinoinensis
CiPaw.04G071100 Carya illinoinensis
COL.COLO4_14311 Corchorus olitorius
Cpa.g.sc107.54 Carica papaya
CsaV3_3G017100 Cucumis sativus L.
CSS0016459 Camellia sinensis var. sinensis
CSS0038653 Camellia sinensis var. sinensis
DCAR_010313 Daucus carota
DCAR_031566 Daucus carota
Dinv28440 Davidia involucrata
Duzib084G0816 Durio zibethinus
Duzib205G0262 Durio zibethinus
ECA232G1051 Erigeron canadensis
EL10Ac3g05616 Beta vulgaris
EL10Ac3g05641 Beta vulgaris
Eucgr.A02787 Eucalyptus grandis
FAN01G0434 Fragaria x ananassa
FAN03G2582 Fragaria x ananassa
FAN03G2589 Fragaria x ananassa
FAN06G3626 Fragaria x ananassa
FAN06G3908 Fragaria x ananassa
FAN10G4138 Fragaria x ananassa
FvH4_7g29500 Fragaria vesca
Glyma.10G235900 Glycine max
Glyma.20G158600 Glycine max
Gohir.A12G257700 Gossypium hirsutum
Gohir.D12G259000 Gossypium hirsutum
Gorai.008G277400 Gossypium raimondii
GSVIVG01028975001 Vitis vinifera
HanXRQChr09g0253591 Helianthus annuus
Haze_13705 Corylus avellana
Hma1.2p1_1438F.1_g283370 Hydrangea macrophylla
HPP92_014751 Vanilla planifolia
Lalb_Chr01g0009311 Lupinus albus
Lalb_Chr02g0141051 Lupinus albus
Lj2g0008451 Lotus japonicus
Lj5g0019820 Lotus japonicus
Lj8C24G5 Lonicera japonica
Lsat_1_v5_gn_9_55961 Lactuca sativa
Manes.06G147400 Manihot esculenta
MBI17_g21973_MAGBIO Magnolia biondii
MD01G1201100 Malus domestica
Medtr1g100593 Medicago truncatula
Medtr6g045263 Medicago truncatula
Migut.F00337 Erythranthe guttata
MSTRG.27102 Avicennia marina
Nitab4.5_0005441g0030 Nicotiana tabacum
Oeu056257.1 Olea europaea
Os10g0506000 Oryza sativa ssp. japonica
Peaxi162Scf01049g00009 Petunia axillaris
PGR004G2488 Punica granatum
PGSC0003DMG400022513 Solanum tuberosum
Phvul.007G069900 Phaseolus vulgaris
Potri.012G141400 Populus trichocarpa
Potri.015G144100 Populus trichocarpa
Prupe.2G083800 Prunus persica
Prupe.2G294500 Prunus persica
Psat6g198600 Pisum sativum
PSO210G3347 Papaver somniferum
PSO210G6232 Papaver somniferum
PSO832G0287 Papaver somniferum
PSO832G4086 Papaver somniferum
QL09p014180 Quercus lobata
RcHm_v2.0_Chr1g0377341 Rosa chinensis
Sabra15G0153800 Salix brachista
Sc13g0008700 Simmondsia chinensis
ScUNg0000600 Simmondsia chinensis
Sed0008807 Sechium edule
Sed0026879 Sechium edule
SEGI_17014 Sequoiadendron giganteum
SEGI_37272 Sequoiadendron giganteum
SGA_v2.0_scaffold60G21044 Striga asiatica
SHI13783 Sapria himalayana
Solyc01g097730.4 Solanum lycopersicum
Sopen01g041340 Solanum pennellii
Sp1g41250 Schrenkiella parvula
Sp5g03150 Schrenkiella parvula
TAR367G0010 Trochodendron aralioides
TAR629G1232 Trochodendron aralioides
THA.LOC104815678 Tarenaya hassleriana
THA.LOC104822701 Tarenaya hassleriana
Thecc.03G176800 Theobroma cacao
Thhalv10005935m.g Eutrema salsugineum
Thhalv10011441m.g Eutrema salsugineum
TPR.G10744 Trifolium pratense
TPR.G10755 Trifolium pratense
TPR.G14338 Trifolium pratense
TPR.G19628 Trifolium pratense
TPR.G9984 Trifolium pratense
TWI23G0309 Tripterygium wilfordii
TWI39G1137 Tripterygium wilfordii
vmacro06680 Vaccinium macrocarpon
VMungo0720G2001 Vigna mungo
Zm00001eb044070 Zea mays

User provided reference genes

Program Settings