Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p12180 Brassica napus
Aa31LG3G10760 Aethionema arabicum
Actinidia09713 Actinidia chinensis
Ah.04g165680 Amaranthus hybridus
AL8G30290 Arabidopsis lyrata
Aqoxy1G03294 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea
AT5G54850 Arabidopsis thaliana
ATR0752G130 Amborella trichopoda
Atru.chr2.3278 Acer truncatum
AUR62015707 Chenopodium quinoa
AUR62020499 Chenopodium quinoa
BcaB08g35851 Brassica carinata
BcaC04g20292 Brassica carinata
BolC9t57410H Brassica oleracea
BraA10t43314Z Brassica rapa
C09p45400 Brassica napus
CAN.G337.106 Capsicum annuum
CANSAT21G1553 Cannabis sativa
CARHR268180 Cardamine hirsuta
Carub.0008s1514 Capsella rubella
Ca_06306_v3 Cicer arietinum L.
Cc05_g04810 Coffea canephora
Cc05_g13510 Coffea canephora
Cfa020385 Carpinus fangiana
Ciclev10010329m.g Citrus clementina
CiPaw.11G187200 Carya illinoinensis
CiPaw.12G128000 Carya illinoinensis
ClCG05G014450 Citrullus lanatus
COL.COLO4_09632 Corchorus olitorius
Cpa.g.sc97.35 Carica papaya
CsaV3_3G023280 Cucumis sativus L.
CSS0032413 Camellia sinensis var. sinensis
DCAR_021174 Daucus carota
Dinv40735 Davidia involucrata
Duzib170G0312 Durio zibethinus
Duzib213G1024 Durio zibethinus
ECA234G1543 Erigeron canadensis
ECA236G2121 Erigeron canadensis
FAN11G0604 Fragaria x ananassa
FAN16G0333 Fragaria x ananassa
FAN21G0668 Fragaria x ananassa
FAN25G3736 Fragaria x ananassa
FvH4_3g22210 Fragaria vesca
Glyma.02G289500 Glycine max
Glyma.09G100100 Glycine max
Glyma.14G025400 Glycine max
Glyma.18G101700 Glycine max
Gohir.A01G077900 Gossypium hirsutum
Gohir.A04G019100 Gossypium hirsutum
Gohir.D01G065000 Gossypium hirsutum
Gohir.D05G366600 Gossypium hirsutum
Gorai.002G086700 Gossypium raimondii
Gorai.009G425000 Gossypium raimondii
HanXRQChr05g0159131 Helianthus annuus
HanXRQChr10g0305811 Helianthus annuus
HanXRQChr11g0336271 Helianthus annuus
Haze_09647 Corylus avellana
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla
HPP92_012322 Vanilla planifolia
HPP92_012395 Vanilla planifolia
HPP92_014114 Vanilla planifolia
Lalb_Chr04g0248581 Lupinus albus
Lalb_Chr10g0106921 Lupinus albus
Lj1P869T51 Lonicera japonica
Lj4g0016834 Lotus japonicus
Lj6g0021335 Lotus japonicus
Lj8E167T2 Lonicera japonica
LjContig00351g0007061 Lotus japonicus
Lsat_1_v5_gn_5_125321 Lactuca sativa
Manes.03G126700 Manihot esculenta
Manes.15G073700 Manihot esculenta
MBI18_g09843_MAGBIO Magnolia biondii
MD11G1222100 Malus domestica
Medtr5g092090 Medicago truncatula
MELO3C018076.2 Cucumis melo
Migut.H01842 Erythranthe guttata
Migut.M01783 Erythranthe guttata
MSTRG.6907 Avicennia marina
Nitab4.5_0000397g0340 Nicotiana tabacum
Nitab4.5_0000653g0070 Nicotiana tabacum
Nitab4.5_0000749g0110 Nicotiana tabacum
Nitab4.5_0013016g0010 Nicotiana tabacum
Nn1g03582 Nelumbo nucifera
Oeu005460.1 Olea europaea
Oeu021395.2 Olea europaea
Oeu062604.3 Olea europaea
Os07g0520600 Oryza sativa ssp. japonica
Peaxi162Scf00450g00084 Petunia axillaris
Peaxi162Scf01097g00025 Petunia axillaris
PGR031G3409 Punica granatum
PGSC0003DMG400001093 Solanum tuberosum
PGSC0003DMG400013920 Solanum tuberosum
PGSC0003DMG400014393 Solanum tuberosum
Phvul.006G038800 Phaseolus vulgaris
Phvul.008G265600 Phaseolus vulgaris
Potri.001G421000 Populus trichocarpa
Potri.011G136600 Populus trichocarpa
Prupe.4G209200 Prunus persica
Psat2g015240 Pisum sativum
PSO541G5959 Papaver somniferum
PSO675G2145 Papaver somniferum
PSO832G0238 Papaver somniferum
QL08p011874 Quercus lobata
QL08p012043 Quercus lobata
RcHm_v2.0_Chr5g0038281 Rosa chinensis
Rhsim04G0001000 Rhododendron simsii
Rhsim04G0002100 Rhododendron simsii
Sabra16G0285900 Salix brachista
SalBow7G1695 Salvia bowleyana
Sc16g0006260 Simmondsia chinensis
Sed0008399 Sechium edule
Sed0023999 Sechium edule
SEGI_38354 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04301 Striga asiatica
Solyc07g064320.3 Solanum lycopersicum
Solyc10g006360.2 Solanum lycopersicum
Sopen07g032470 Solanum pennellii
Sopen10g002310 Solanum pennellii
Sp6g16810 Schrenkiella parvula
TAR626G0147 Trochodendron aralioides
THA.LOC104813420 Tarenaya hassleriana
Thecc.07G043800 Theobroma cacao
Thhalv10014809m.g Eutrema salsugineum
TWI38G1097 Tripterygium wilfordii
TWI39G0743 Tripterygium wilfordii
unitig_0.g2389 Utricularia gibba
VMungo0540G0361 Vigna mungo
VMungo0647G1996 Vigna mungo
Zm00001eb322840 Zea mays

User provided reference genes

Program Settings