Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p16890 Brassica napus
A07p15420 Brassica napus
Aa31LG7G5050 Aethionema arabicum
Actinidia18208 Actinidia chinensis
Ah.02g116310 Amaranthus hybridus
AL1G33910 Arabidopsis lyrata
AL2G36620 Arabidopsis lyrata
Aqoxy5G03966 Aquilegia oxysepala
Aqoxy7G01356 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea
AT1G20890 Arabidopsis thaliana
AT1G76480 Arabidopsis thaliana
ATR0693G003 Amborella trichopoda
Atru.chr4.1221 Acer truncatum
Atru.chr7.2675 Acer truncatum
AUR62010536 Chenopodium quinoa
AUR62017359 Chenopodium quinoa
BcaB03g14295 Brassica carinata
BcaB07g32084 Brassica carinata
BcaC05g25998 Brassica carinata
BcaC06g34845 Brassica carinata
BolC2t09396H Brassica oleracea
BolC5t30654H Brassica oleracea
BolC7t42805H Brassica oleracea
BraA06t24798Z Brassica rapa
BraA07t29281Z Brassica rapa
C02p33000 Brassica napus
C05p19520 Brassica napus
C07p22730 Brassica napus
CANSAT56G2391 Cannabis sativa
CARHR021320 Cardamine hirsuta
Carub.0001s2036 Capsella rubella
Cc00_g09250 Coffea canephora
CDE02G0943 Ceratophyllum demersum
Ciclev10022280m.g Citrus clementina
CiPaw.07G201500 Carya illinoinensis
ClCG02G014210 Citrullus lanatus
ClCG11G015010 Citrullus lanatus
COL.COLO4_21009 Corchorus olitorius
Cpa.g.sc1868.1 Carica papaya
Cre12.g547734 Chlamydomonas reinhardtii
CsaV3_3G048420 Cucumis sativus L.
CSS0002565 Camellia sinensis var. sinensis
Dinv27944 Davidia involucrata
Duzib168G0475 Durio zibethinus
EL10Ac5g12654 Beta vulgaris
Eucgr.C02988 Eucalyptus grandis
FAN15G1520 Fragaria x ananassa
FAN20G2834 Fragaria x ananassa
FAN27G1715 Fragaria x ananassa
FvH4_2g35150 Fragaria vesca
Glyma.03G235400 Glycine max
Glyma.19G233100 Glycine max
Gohir.A07G022184 Gossypium hirsutum
Gohir.D07G024000 Gossypium hirsutum
Gorai.001G024700 Gossypium raimondii
GSVIVG01035325001 Vitis vinifera
HanXRQChr03g0078001 Helianthus annuus
HanXRQChr14g0439211 Helianthus annuus
Haze_01966 Corylus avellana
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla
HPP92_009604 Vanilla planifolia
Hund19578 Selenicereus undatus
Lalb_Chr08g0242881 Lupinus albus
Lalb_Chr24g0397251 Lupinus albus
Lj1g0020400 Lotus japonicus
Lj7A696G17 Lonicera japonica
Lsat_1_v5_gn_3_56860 Lactuca sativa
Lsat_1_v5_gn_4_62960 Lactuca sativa
Manes.02G043100 Manihot esculenta
Mapoly0062s0068 Marchantia polymorpha
MBI02_g46987_MAGBIO Magnolia biondii
MCO02G048 Micromonas commoda
MD08G1109000 Malus domestica
Medtr7g112710 Medicago truncatula
MELO3C003477.2 Cucumis melo
Migut.A00171 Erythranthe guttata
MSTRG.25924 Avicennia marina
Nitab4.5_0000318g0060 Nicotiana tabacum
Nitab4.5_0002021g0070 Nicotiana tabacum
Nn6g34840 Nelumbo nucifera
Oeu002722.1 Olea europaea
Oeu033885.1 Olea europaea
Os03g0804100 Oryza sativa ssp. japonica
Os08g0374900 Oryza sativa ssp. japonica
Peaxi162Scf00699g00655 Petunia axillaris
PGR044G0118 Punica granatum
PGSC0003DMG401025462 Solanum tuberosum
Phvul.006G089400 Phaseolus vulgaris
Potri.006G234800 Populus trichocarpa
Pp3c24_1520 Physcomitrium patens
Prupe.1G443600 Prunus persica
Psat0s1830g0160 Pisum sativum
Psat0s1830g0280 Pisum sativum
PSO063G0290 Papaver somniferum
PSO063G1479 Papaver somniferum
PSO063G2632 Papaver somniferum
PSO063G4631 Papaver somniferum
PSO063G5891 Papaver somniferum
PSO832G1534 Papaver somniferum
PSO832G3354 Papaver somniferum
PSO832G4156 Papaver somniferum
QL12p040865 Quercus lobata
RcHm_v2.0_Chr6g0306801 Rosa chinensis
Rhsim07G0145000 Rhododendron simsii
Sabra06G0183200 Salix brachista
SalBow4G3076 Salvia bowleyana
SalBow6G5216 Salvia bowleyana
Sc09g0009490 Simmondsia chinensis
Sc09g0009510 Simmondsia chinensis
Sc09g0009520 Simmondsia chinensis
Sed0000338 Sechium edule
Sed0022019 Sechium edule
SEGI_03586 Sequoiadendron giganteum
SEGI_27706 Sequoiadendron giganteum
SGA_v2.0_scaffold103G30048 Striga asiatica
Solyc08g066030.3 Solanum lycopersicum
Sopen08g019690 Solanum pennellii
Sp1g18590 Schrenkiella parvula
TAR383G0888 Trochodendron aralioides
TAR624G0371 Trochodendron aralioides
THA.LOC104812009 Tarenaya hassleriana
Thecc.09G049100 Theobroma cacao
Thhalv10008823m.g Eutrema salsugineum
Thhalv10019630m.g Eutrema salsugineum
TPR.G29192 Trifolium pratense
TPR.G33208 Trifolium pratense
TWI34G0524 Tripterygium wilfordii
TWI63G1351 Tripterygium wilfordii
unitig_0.g2567 Utricularia gibba
vmacro05269 Vaccinium macrocarpon
vmacro07473 Vaccinium macrocarpon
Zm00001eb061390 Zea mays
Zm00001eb212650 Zea mays

User provided reference genes

Program Settings