Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p02320 Brassica napus
Aa31LG6G8840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2253 Anthoceros agrestis
Actinidia23335 Actinidia chinensis
Ah.05g178160 Amaranthus hybridus
AL1G47130 Arabidopsis lyrata
AL1G50540 Arabidopsis lyrata
Aqoxy6G00127 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BNJ0D6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H1JXTH Arachis hypogaea
AT1G35660 Arabidopsis thaliana
ATR0003G012 Amborella trichopoda
ATR0003G024 Amborella trichopoda
ATR1101G015 Amborella trichopoda
Atru.chr13.1758 Acer truncatum
AUR62004640 Chenopodium quinoa
AUR62022696 Chenopodium quinoa
BcaB07g33624 Brassica carinata
BcaC08g43328 Brassica carinata
BolC6t35788H Brassica oleracea
BolC6t35790H Brassica oleracea
BraA06t23439Z Brassica rapa
C06p06800 Brassica napus
C06p06840 Brassica napus
CAN.G199.9 Capsicum annuum
CANSAT78G0610 Cannabis sativa
CARHR034440 Cardamine hirsuta
Carub.0001s0936 Capsella rubella
Carub.0001s3325 Capsella rubella
Ca_11749_v3 Cicer arietinum L.
CBR_g40969 Chara braunii
Cc10_g10690 Coffea canephora
Cc10_g10700 Coffea canephora
CDE08G0048 Ceratophyllum demersum
CDE08G1571 Ceratophyllum demersum
Cfa013846 Carpinus fangiana
Ciclev10000028m.g Citrus clementina
CiPaw.08G058900 Carya illinoinensis
ClCG11G008140 Citrullus lanatus
COL.COLO4_04233 Corchorus olitorius
Cpa.g.sc66.38 Carica papaya
Cpa.g.sc66.39 Carica papaya
Cpa.g.sc66.40 Carica papaya
Cpa.g.sc66.41 Carica papaya
CsaV3_2G033490 Cucumis sativus L.
CSS0014231 Camellia sinensis var. sinensis
DCAR_001048 Daucus carota
Dinv41715 Davidia involucrata
Duzib116G0663 Durio zibethinus
ECA152G0004 Erigeron canadensis
EL10Ac1g00088 Beta vulgaris
Eucgr.F04123 Eucalyptus grandis
FAN02G3326 Fragaria x ananassa
FAN15G1969 Fragaria x ananassa
FAN24G1577 Fragaria x ananassa
FvH4_2g11773 Fragaria vesca
Glyma.02G158100 Glycine max
Gohir.A05G250551 Gossypium hirsutum
Gohir.A05G250600 Gossypium hirsutum
Gohir.D05G253200 Gossypium hirsutum
Gorai.009G263800 Gossypium raimondii
GSVIVG01034473001 Vitis vinifera
HanXRQChr04g0107521 Helianthus annuus
Haze_22520 Corylus avellana
Hma1.2p1_0004F.1_g004040 Hydrangea macrophylla
Hma1.2p1_0004F.1_g004045 Hydrangea macrophylla
Hma1.2p1_0004F.1_g004050 Hydrangea macrophylla
Hma1.2p1_0004F.1_g004060 Hydrangea macrophylla
HPP92_025156 Vanilla planifolia
Hund27088 Selenicereus undatus
Lalb_Chr03g0036141 Lupinus albus
Lalb_Chr03g0036151 Lupinus albus
Lj4A496G12 Lonicera japonica
Lj4C496G3 Lonicera japonica
Lj4C503G3 Lonicera japonica
Lj4C503T2 Lonicera japonica
Lj5g0008525 Lotus japonicus
Lsat_1_v5_gn_1_10440 Lactuca sativa
Manes.18G101200 Manihot esculenta
Mapoly0036s0148 Marchantia polymorpha
MD05G1041500 Malus domestica
MD10G1047900 Malus domestica
Medtr1g050670 Medicago truncatula
MELO3C008121.2 Cucumis melo
Migut.C01256 Erythranthe guttata
MSTRG.25441 Avicennia marina
Nitab4.5_0000303g0150 Nicotiana tabacum
Nitab4.5_0002500g0010 Nicotiana tabacum
Nn1g08372 Nelumbo nucifera
Oeu000547.3 Olea europaea
Os01g0873800 Oryza sativa ssp. japonica
Peaxi162Scf00268g01123 Petunia axillaris
Peaxi162Scf00268g01128 Petunia axillaris
PGR102G0553 Punica granatum
Phvul.007G245600 Phaseolus vulgaris
Potri.019G083100 Populus trichocarpa
Pp3c15_6360 Physcomitrium patens
Pp3c15_6380 Physcomitrium patens
Prupe.8G057200 Prunus persica
Psat6g094080 Pisum sativum
PSO170G3854 Papaver somniferum
PSO782G3241 Papaver somniferum
QL02p033652 Quercus lobata
QL02p033674 Quercus lobata
QL02p033685 Quercus lobata
RcHm_v2.0_Chr6g0272031 Rosa chinensis
Rhsim06G0094000 Rhododendron simsii
Sabra19G0094600 Salix brachista
SalBow7G4130 Salvia bowleyana
Sc23g0001270 Simmondsia chinensis
Sed0013995 Sechium edule
SEGI_03904 Sequoiadendron giganteum
SEGI_08751 Sequoiadendron giganteum
SEGI_16135 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32485 Striga asiatica
SHI09011 Sapria himalayana
SHI09012 Sapria himalayana
SHI09014 Sapria himalayana
Solyc06g065360.3 Solanum lycopersicum
Sopen06g023840 Solanum pennellii
Sp1g30370 Schrenkiella parvula
SpUn0216_0010 Schrenkiella parvula
TAR628G1581 Trochodendron aralioides
THA.LOC104806788 Tarenaya hassleriana
Thecc.08G184000 Theobroma cacao
Thhalv10001809m.g Eutrema salsugineum
TPR.G22709 Trifolium pratense
TWI34G1956 Tripterygium wilfordii
unitig_0.g275 Utricularia gibba
unitig_0.g276 Utricularia gibba
vmacro12489 Vaccinium macrocarpon
VMungo0720G0756 Vigna mungo
VMungo0720G1167 Vigna mungo
Zm00001eb146280 Zea mays
Zm00001eb324780 Zea mays

User provided reference genes

Program Settings