Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p24020 Brassica napus
Aa31LG5G5730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1588 Anthoceros agrestis
Actinidia27691 Actinidia chinensis
Actinidia37512 Actinidia chinensis
Ah.11g049730 Amaranthus hybridus
AL4G26390 Arabidopsis lyrata
Aqoxy2G03640 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6W8MXB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N9I7Q3 Arachis hypogaea
AT2G31190 Arabidopsis thaliana
ATR0736G118 Amborella trichopoda
Atru.chr5.1673 Acer truncatum
AUR62011874 Chenopodium quinoa
AUR62024718 Chenopodium quinoa
BcaB06g28429 Brassica carinata
BcaB06g28512 Brassica carinata
BolC4t27558H Brassica oleracea
BraA04t17923Z Brassica rapa
C04p60690 Brassica napus
CAN.G184.8 Capsicum annuum
CANSAT35G0929 Cannabis sativa
CARHR124790 Cardamine hirsuta
Carub.0004s1247 Capsella rubella
Ca_08672_v3 Cicer arietinum L.
Ca_13180_v3 Cicer arietinum L.
CBR_g49568 Chara braunii
Cc04_g14920 Coffea canephora
Cc05_g06590 Coffea canephora
Cc06_g16080 Coffea canephora
CDE03G0270 Ceratophyllum demersum
CDE04G2053 Ceratophyllum demersum
Cfa002421 Carpinus fangiana
Ciclev10023734m.g Citrus clementina
CiPaw.13G172300 Carya illinoinensis
ClCG09G007800 Citrullus lanatus
COL.COLO4_05896 Corchorus olitorius
Cpa.g.sc50.20 Carica papaya
Cpa.g.sc50.22 Carica papaya
CsaV3_7G027330 Cucumis sativus L.
CSS0001414 Camellia sinensis var. sinensis
DCAR_012547 Daucus carota
Dinv34621 Davidia involucrata
Dinv34622 Davidia involucrata
Duzib133G0949 Durio zibethinus
Duzib138G0621 Durio zibethinus
ECA236G3842 Erigeron canadensis
ECA248G1569 Erigeron canadensis
EL10Ac5g10402 Beta vulgaris
Eucgr.B01556 Eucalyptus grandis
FAN15G0777 Fragaria x ananassa
FAN24G1897 Fragaria x ananassa
FAN27G1683 Fragaria x ananassa
FvH4_2g21510 Fragaria vesca
Glyma.03G163000 Glycine max
Glyma.05G141100 Glycine max
Glyma.13G123400 Glycine max
Glyma.19G164500 Glycine max
Gohir.A07G213000 Gossypium hirsutum
Gohir.D07G219100 Gossypium hirsutum
Gorai.001G253600 Gossypium raimondii
GSVIVG01028326001 Vitis vinifera
HanXRQChr04g0112661 Helianthus annuus
HanXRQChr09g0254391 Helianthus annuus
Haze_24627 Corylus avellana
HPP92_026239 Vanilla planifolia
Hund09599 Selenicereus undatus
Lalb_Chr02g0152411 Lupinus albus
Lj1A66G58 Lonicera japonica
Lj1g0005369 Lotus japonicus
Lj2A1152G41 Lonicera japonica
Lj5g0021558 Lotus japonicus
Lsat_1_v5_gn_0_1921 Lactuca sativa
Lsat_1_v5_gn_1_81301 Lactuca sativa
Lsat_1_v5_gn_5_183361 Lactuca sativa
Lsat_1_v5_gn_5_183400 Lactuca sativa
Lsat_1_v5_gn_8_93000 Lactuca sativa
Manes.12G032100 Manihot esculenta
Mapoly0015s0205 Marchantia polymorpha
MBI07_g30496_MAGBIO Magnolia biondii
MBI10_g29590_MAGBIO Magnolia biondii
MD05G1197700 Malus domestica
MD10G1184300 Malus domestica
Medtr7g096920 Medicago truncatula
MELO3C015730.2 Cucumis melo
Migut.D00424 Erythranthe guttata
MSTRG.21495 Avicennia marina
Nitab4.5_0000206g0090 Nicotiana tabacum
Nitab4.5_0001587g0020 Nicotiana tabacum
Nn3g19650 Nelumbo nucifera
Os04g0517300 Oryza sativa ssp. japonica
Peaxi162Scf00141g00928 Petunia axillaris
Peaxi162Scf00141g00930 Petunia axillaris
Peaxi162Scf00854g00219 Petunia axillaris
PGR004G1596 Punica granatum
Phvul.001G160800 Phaseolus vulgaris
Phvul.007G193000 Phaseolus vulgaris
Potri.002G038600 Populus trichocarpa
Potri.005G224000 Populus trichocarpa
Pp3c16_18490 Physcomitrium patens
Prupe.8G224000 Prunus persica
Psat3g057680 Pisum sativum
PSO017G5675 Papaver somniferum
PSO063G6478 Papaver somniferum
QL09p038696 Quercus lobata
QL09p049090 Quercus lobata
RcHm_v2.0_Chr6g0288161 Rosa chinensis
Rhsim13G0034500 Rhododendron simsii
Sabra05G0172800 Salix brachista
SalBow4G2933 Salvia bowleyana
Sc24g0003140 Simmondsia chinensis
Sc24g0003150 Simmondsia chinensis
Sed0010920 Sechium edule
SEGI_08575 Sequoiadendron giganteum
SEGI_10356 Sequoiadendron giganteum
SEGI_12966 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00616 Striga asiatica
SMO364G0160 Selaginella moellendorffii
Solyc05g026140.4 Solanum lycopersicum
Sopen05g022350 Solanum pennellii
Sp4g13680 Schrenkiella parvula
TAR365G0290 Trochodendron aralioides
TAR636G1025 Trochodendron aralioides
THA.LOC104800871 Tarenaya hassleriana
Thecc.01G258700 Theobroma cacao
Thhalv10016683m.g Eutrema salsugineum
TPR.G28632 Trifolium pratense
TWI12G1280 Tripterygium wilfordii
unitig_8.g3733 Utricularia gibba
vmacro02660 Vaccinium macrocarpon
VMungo0720G1063 Vigna mungo
VMungo1383G3618 Vigna mungo
Zm00001eb077710 Zea mays
Zm00001eb077720 Zea mays
Zm00001eb265180 Zea mays

User provided reference genes

Program Settings